| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2779 |
|---|
| Symbol | |
|---|
| ID | 6286644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2891675 |
|---|
| End bp | 2892487 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642626350 |
|---|
| Product | Arogenate dehydratase |
|---|
| Protein accession | YP_001900335 |
|---|
| Protein GI | 187929848 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAACC GTTTCATCCG CACGAGCGCC CTGCTGCTGT GCGCCTGCGC CGCGGCACCC
GCCCTGGCGC AAACCACGCA AGCCACCAAC CGACTCGACG AAATCATCGC GCGCGGCACG
CTGCGCGTCG GCACCACTGG CGACTACAAG CCCTTTACCT ACAAGAACCC CGCCGATGGC
CGCTTCATCG GCCTGGACGT CGAGATGGGC GAACGTCTGG CCAAAGCCCT CGGCGTAAAG
CTGGAAATCG TGCCGACCAC GTGGTCGACG CTGATGCAGG ACTTTGCGGC TGACCGCTAC
GACATCGCCA TGAGCGGGGT GTCGGTCACG CTGGAGCGGC AGAAGAAGGC GTTCTATTCG
ATTCCGTATC AACGCGACGG CAAGACGCCG ATCACGCGTT GCGAGAACCA GTCGAAATAT
CAGACGCTGG CGCAGATCGA CCAGCCGAAC GTGCGGGCCG TGGTCAACCC AGGCGGCACC
AACGAAAAAT TTGCGCGCGA GCATCTGAAG CAAGCGCAGA TTCGCGTGTA TCCGGACAAC
GTGACGATCT TCAACGAGAT CGTCGCCGGC CGCGCAGACC TGATGATGAC TGACGCGGTG
GAAACCAAGC TGCAGCAGAA GCTGCACCCC GAACTGTGCG CCGTGCATCC GGAAGCGCCG
TTCGATTTCT CCGAGAAGGC CTACCTGCTC CCGCGCGACG TCGTGTTCAA GAACTTTGTC
GACCAGTGGC TGCGGCAGAC CGCCGAGAGC GGTGAGTTCG CCAAGCGCTT TGATGCGTGG
CTGGCGTATC CGTGGAATGC GCCGGTCAAG TGA
|
|---|
| Protein sequence | MFNRFIRTSA LLLCACAAAP ALAQTTQATN RLDEIIARGT LRVGTTGDYK PFTYKNPADG
RFIGLDVEMG ERLAKALGVK LEIVPTTWST LMQDFAADRY DIAMSGVSVT LERQKKAFYS
IPYQRDGKTP ITRCENQSKY QTLAQIDQPN VRAVVNPGGT NEKFAREHLK QAQIRVYPDN
VTIFNEIVAG RADLMMTDAV ETKLQQKLHP ELCAVHPEAP FDFSEKAYLL PRDVVFKNFV
DQWLRQTAES GEFAKRFDAW LAYPWNAPVK
|
|---|
| |