Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_4078 |
Symbol | |
ID | 5382549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | - |
Start bp | 1507609 |
End bp | 1508442 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640836763 |
Product | extracellular solute-binding protein |
Protein accession | YP_001372610 |
Protein GI | 153011396 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGAC GTAAGTTTAT CCAGACAACG CTTTTGGGTA GCGCAGCGGT CATGCTTGCT CCCGGCTTTT CGTGGGCTGT CGAAGACGGC GCAACACTGA AATCCATCAA GGACCGGGGT GCCCTGCGTA TCGGTGTGTT CAATGGTACA CCGCCTTATT ATCAGAAAAA TCTCGCTACC GGCGAATGGG ACGGCTTCTG CGTTTCCATG GGCAGGGACT TGGCGGAATA TATTGGTGTT CCGCTCGAAA TGGTCGAAAC CACCTGGGGT AATTCCGTCA TGGACCTTCA GGGCGGCAAA ATCGACATCA TGTTTGCCCT CAGCAACAAT CCTGAGCGCG CGAAATCCGT CGATTTCACC GAAGCCATGA TGGATAACGT CTTTACCGTC ATCACCGGCA AGGACCGCGA GGTCAAAAAT TGGGAAGAAT TGAACAAGCC GGAAATCCGC GTCACGGTTG ATCTCGGTTC CACACAGGAT CTTTTCGCCC GCAAAACCTT GCCCAATTGT ACGCTTGTTG CACTCAAGGG AGCGGATGAA ACAGTTATCG CACTACAGTC TGGCCGGGCA GATGTGATTG TGCAGGTTGC TCTGATGTCC GTGGTGACGG CGCACAAGCT TGGCAACAAA TTTAAGGTTT TTGTTCCAGA GCCGCTGGAT AGCCAGCCAA CGACGATTGG TGTGCGCAAA GACGAAAAGG GCGAATTCCG CGACTACGTT GATGTTTGGC TTAAAAAGCG CCGCGAGGAA GGCAAGGTCA ATGAATGGAT TGTCAGCAGC CTGTCGCTTG TTGGCGTGCA GCCATCTGAC CTGCCGCCAA CTTTGAAGTT CTGA
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Protein sequence | MNRRKFIQTT LLGSAAVMLA PGFSWAVEDG ATLKSIKDRG ALRIGVFNGT PPYYQKNLAT GEWDGFCVSM GRDLAEYIGV PLEMVETTWG NSVMDLQGGK IDIMFALSNN PERAKSVDFT EAMMDNVFTV ITGKDREVKN WEELNKPEIR VTVDLGSTQD LFARKTLPNC TLVALKGADE TVIALQSGRA DVIVQVALMS VVTAHKLGNK FKVFVPEPLD SQPTTIGVRK DEKGEFRDYV DVWLKKRREE GKVNEWIVSS LSLVGVQPSD LPPTLKF
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