Gene Rpic12D_2375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2375 
Symbol 
ID8020039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2498212 
End bp2499027 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content61% 
IMG OID644831157 
ProductArogenate dehydratase 
Protein accessionYP_002982320 
Protein GI241663960 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.380609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCACC GTTTCATCCG CACCAGCAGC GCCCTGCTGC TGTGCGCCTG TGCCGCGGCT 
CCCGCCCTGT CGCAAACCGC GCCAGCCACC AACCGTCTCG ACGAAATCAT CGCGCGCGGT
ACGCTCCGCG TCGGCACCAC CGGCGACTAC AAGCCGTTCA CTTACAAGAA TCCTGCCGAT
GGCCGCTTTA TCGGCCTGGA TGTCGAGATG GGGGAACGTC TGGCCAAGGC ACTCGGCGTG
AAGCTGGAAA TCGTTCCAAC CACGTGGTCG ACGCTGATGC AGGACTTTGC GGCTGACCGC
TACGACATCG CCATGAGCGG GGTGTCGGTC ACGCTGGAGC GGCAGAAGAA GGCGTTCTAT
TCGATTCCGT ATCAACGCGA CGGCAAGACG CCGATCACGC GTTGCGAGAA CCAGTCGAAA
TATCAGACGC TGGCGCAGAT CGATCAGCCG AACGTGCGTG CCGTGGTCAA CCCGGGCGGC
ACCAACGAGA AATTCGCGCG CGAACATCTG AAGCAGGCGC AGATTCGCGT GTATCCGGAC
AACGTGACCA TCTTCAACGA GATCGTCGCC GGCCGCGCAG ACCTGATGAT GACTGACGCG
GTCGAAACCA AGCTGCAGCA GAAGCTGCAC CCGGAGCTGT GTGCCGTGCA CCCGGAAGCG
CCATTCGATT TTTCGGAGAA GGCCTACCTG CTGCCCCGCG ACGTCGTGTT CAAGAACTTC
GTCGACCAAT GGCTGCGGCA GACGACCGAG AGCGGTGAAT TCGCCAAGCG CTTTGATGCA
TGGCTGGCGT ATCCGTGGAG TACACCGGCC AAGTAA
 
Protein sequence
MFHRFIRTSS ALLLCACAAA PALSQTAPAT NRLDEIIARG TLRVGTTGDY KPFTYKNPAD 
GRFIGLDVEM GERLAKALGV KLEIVPTTWS TLMQDFAADR YDIAMSGVSV TLERQKKAFY
SIPYQRDGKT PITRCENQSK YQTLAQIDQP NVRAVVNPGG TNEKFAREHL KQAQIRVYPD
NVTIFNEIVA GRADLMMTDA VETKLQQKLH PELCAVHPEA PFDFSEKAYL LPRDVVFKNF
VDQWLRQTTE SGEFAKRFDA WLAYPWSTPA K