32 homologs were found in PanDaTox collection
for query gene BcerKBAB4_5312 on replicon NC_010182
Organism: Bacillus weihenstephanensis KBAB4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010182  BcerKBAB4_5312  XRE family transcriptional regulator  100 
 
 
148 aa  300  5.000000000000001e-81  Bacillus weihenstephanensis KBAB4  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU3324  Cro/CI family transcriptional regulator  28.57 
 
 
212 aa  46.6  0.0001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2927  transcriptional regulator, XRE family  35.09 
 
 
130 aa  45.4  0.0002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.298234 
 
 
-
 
NC_008312  Tery_2752  XRE family transcriptional regulator  26.51 
 
 
113 aa  45.1  0.0003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.272342  normal 
 
 
-
 
NC_014150  Bmur_1900  transcriptional regulator, XRE family  30.12 
 
 
104 aa  44.7  0.0004  Brachyspira murdochii DSM 12563  Bacteria  decreased coverage  1.43236e-17  n/a   
 
 
-
 
NC_013530  Xcel_2180  transcriptional regulator, XRE family  40.82 
 
 
101 aa  44.7  0.0005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.165219  n/a   
 
 
-
 
NC_013946  Mrub_2305  XRE family transcriptional regulator  35.09 
 
 
130 aa  44.3  0.0005  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.0843666 
 
 
-
 
NC_010676  Bphyt_4439  transcriptional regulator, XRE family  36.84 
 
 
190 aa  42.7  0.001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.957299  normal 
 
 
-
 
NC_014158  Tpau_1480  transcriptional regulator, XRE family  41.82 
 
 
116 aa  43.5  0.001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0336  XRE family transcriptional regulator  36.84 
 
 
140 aa  43.5  0.001  Deinococcus geothermalis DSM 11300  Bacteria  unclonable  0.000000000838003  normal  0.0169736 
 
 
-
 
NC_008009  Acid345_1539  MerR family transcriptional regulator  38.18 
 
 
292 aa  42.7  0.002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0172454  normal  0.655759 
 
 
-
 
NC_007952  Bxe_B0758  XRE family transcriptional regulator  36.84 
 
 
190 aa  42.7  0.002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_2004  MerR family transcriptional regulator  38 
 
 
178 aa  42.4  0.002  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00158357  normal 
 
 
-
 
NC_011661  Dtur_0679  transcriptional regulator, XRE family  33.93 
 
 
105 aa  42.7  0.002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0230  transcriptional regulator  33.82 
 
 
197 aa  42  0.003  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0716  DNA-binding protein  37.35 
 
 
90 aa  42  0.003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2181  Cro/CI family transcriptional regulator  31.15 
 
 
184 aa  40.8  0.006  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_0650  transcriptional regulator, XRE family  29.11 
 
 
110 aa  40.8  0.006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1659  helix-turn-helix domain protein  42.86 
 
 
266 aa  40.8  0.006  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1788  XRE family transcriptional regulator  31.15 
 
 
184 aa  40.8  0.006  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3556  XRE family transcriptional regulator  31.15 
 
 
184 aa  40.8  0.006  Pseudomonas putida F1  Bacteria  normal  0.427188  normal 
 
 
-
 
NC_013385  Adeg_1668  transcriptional regulator, XRE family  36.36 
 
 
256 aa  40.8  0.007  Ammonifex degensii KC4  Bacteria  hitchhiker  0.0000000231765  n/a   
 
 
-
 
NC_014211  Ndas_4898  transcriptional regulator, XRE family  27.63 
 
 
127 aa  40.8  0.007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.680756  normal 
 
 
-
 
NC_007644  Moth_1827  XRE family transcriptional regulator  36 
 
 
252 aa  40.8  0.007  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0400601  normal 
 
 
-
 
NC_010515  Bcenmc03_4729  XRE family transcriptional regulator  33.33 
 
 
192 aa  40.4  0.008  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2554  transcriptional regulator, XRE family  42.59 
 
 
273 aa  40.4  0.008  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.35211e-22 
 
 
-
 
NC_008543  Bcen2424_5543  XRE family transcriptional regulator  33.33 
 
 
192 aa  40.4  0.008  Burkholderia cenocepacia HI2424  Bacteria  normal  0.827143  normal 
 
 
-
 
NC_008061  Bcen_5317  XRE family transcriptional regulator  33.33 
 
 
192 aa  40.4  0.008  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.221767  n/a   
 
 
-
 
NC_007493  RSP_0641  XRE family transcriptional regulator  37.04 
 
 
211 aa  40  0.01  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.199173  n/a   
 
 
-
 
NC_011892  Mnod_8486  transcriptional regulator, XRE family  37.29 
 
 
204 aa  40  0.01  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2294  XRE family transcriptional regulator  37.04 
 
 
211 aa  40  0.01  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.328361 
 
 
-
 
NC_008254  Meso_1480  XRE family transcriptional regulator  24.49 
 
 
198 aa  40  0.01  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
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