| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1668 |
|---|
| Symbol | |
|---|
| ID | 8491664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1654467 |
|---|
| End bp | 1655237 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646359660 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003239611 |
|---|
| Protein GI | 260893514 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1476] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000231765 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAGTCA ACGGTGAGCG CATAAGGGCT TTGCGGGAAG AGAAGGGCAT GAGCCTTCAT
GATCTGGCGC GTAAGGCGCA GATTTCCCTT TCTTACCTTA GCGAGATCGA GAGGGGCACC
AAGCGGCCTT CCCTTAGGAC CATAGAGAAG TTGGCCCAGG CCTTGAATGT CAGCAAGGCT
CGCCTGGTAG AACCGGAGAC CAAAGAGGGA AAGATAAATG TAGGGGAGCG GATTCGCCTT
TTGCGCACGG AGAAGGGCTG GTCCCTGCAG GAGTTGGCCT GCCGGGCAGG CATATCCGCC
TCCTATCTTA GCGAAATCGA AAGGGGTACC GTATACCCTT CCCTAAGCAC GCTCAAGCGC
CTGGCCGAGG AGCTGGGGGT GGCCCCGGTG ACCTTTTTGG GGCAGCAGGG CACCTTGGGG
GCTAGGCTCA GGGCTTTGCG GGAAGAGTAC GGGCTTACCC AGGCCCAGCT GGCGGCTATG
GCAGGGGTGA CGGCGGGGCT TATCGGGCAG ATCGAGCAGG GAAAGGTGCA GCCTTCGCTC
AAGACCCTGG AGAAGATTGC CCAAGCCATG GGGGTTTCCC CCTGCTATTT CCTGATTGAG
CCCGACGCTT CGGAGCAGGT TTTGAGCATG CTCAATCCGG ACCTGCGGGA GCTCCTAGCC
GATACCAACG TCCAGGCGGT GCTGACCATG CTGGCCAATA TGAGCAAGAA GGAGATCCGC
TTTATCCTGA ACTTCATCCA GCTCTTCAAG CAGTCCGGCT TCTGCGTTTA G
|
|---|
| Protein sequence | MIVNGERIRA LREEKGMSLH DLARKAQISL SYLSEIERGT KRPSLRTIEK LAQALNVSKA
RLVEPETKEG KINVGERIRL LRTEKGWSLQ ELACRAGISA SYLSEIERGT VYPSLSTLKR
LAEELGVAPV TFLGQQGTLG ARLRALREEY GLTQAQLAAM AGVTAGLIGQ IEQGKVQPSL
KTLEKIAQAM GVSPCYFLIE PDASEQVLSM LNPDLRELLA DTNVQAVLTM LANMSKKEIR
FILNFIQLFK QSGFCV
|
|---|
| |