Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2554 |
Symbol | |
ID | 8137896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 2982742 |
End bp | 2983563 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644870163 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003022353 |
Protein GI | 253701164 |
COG category | [S] Function unknown |
COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1.35211e-22 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCTGAGC CAGAGCAGAA TGTGGGCGCG GAGATCCCTG TCGGCCAGTA TCTGAAGAGC GTGCGCGAGT CGCGCGGGTT GAAGCTCGAA GAGGCCTCGC AAGTAACCAA GATCGGCAGG AACTACCTGG CGGCGATCGA GGAAGGGCAG TTCGAGAAGC TCCCCAACGT CGCCTACATC AAGGGATTCC TGAGACTTTA CGCAGGGTAC CTTTCCCTTT CCGGCGACGA GGTGGTCGCA AGGTACGAGC GCGAGCTGGC CCCGGCGGCG AAGCCGCAGG CGGAGCCCCC CCAGCCGCAC CCCGGGATGG AGAACGTGGA AAAGGCGAAG CTCGCCAACC ACGGGCGCTG GATGATACCG GCGCTGCTGC TGGTTCTGGT GGTGCTTGCC GCGCTCTTTT ACTCCGACGG CGAACAGCCT CCCCCCCCGC CGCAGCCGGC TCCTCCGGCG CCGGCCCCCG CACCCGTTAT GGCCCCCATG ACCGCCCCGG TGCAAATGCA GGTCAGTTCG GCTCTCCTGG AGCCTCTAAC CGAGCCGACG CCCGAGGGCC CGCGGAGCGC CGCTTCTGCA GGCAAGCAGG AAGGCGTGGT CCTGAAGCTG CGCTTCAACC GGGACAGCTG GCTCAGCATC ACCATTGACG ACAGCATCTC CCAGCGCTAC GACCTGAAGG CGGGCGACAT CATCGAGTGG AAGGGAAAGC GCTCCTTTTC CTTGGAATTG GGTGACGGCG GCGCCGTCGA AGGGGAATTC AACGGGAGGC CTTTGACGGC GCTCGGGCAG GCCGGACAAC CGGCGCACGT GGATTTGAAA GCGGGACAAT GA
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Protein sequence | MSEPEQNVGA EIPVGQYLKS VRESRGLKLE EASQVTKIGR NYLAAIEEGQ FEKLPNVAYI KGFLRLYAGY LSLSGDEVVA RYERELAPAA KPQAEPPQPH PGMENVEKAK LANHGRWMIP ALLLVLVVLA ALFYSDGEQP PPPPQPAPPA PAPAPVMAPM TAPVQMQVSS ALLEPLTEPT PEGPRSAASA GKQEGVVLKL RFNRDSWLSI TIDDSISQRY DLKAGDIIEW KGKRSFSLEL GDGGAVEGEF NGRPLTALGQ AGQPAHVDLK AGQ
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