| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3556 |
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| Symbol | |
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| ID | 5195437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3974277 |
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| End bp | 3974831 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640588012 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001268865 |
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| Protein GI | 148548763 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.427188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTGC ACGAAGAAAT CGAAGGCCTG GCAGTACTGA TTCGCGACCT GCGCAAGTTC
AAGGGCCTGA CACTGGGCGA GCTGGCACAG CGCATCGGCC GTTCGGTGGG CTTTCTGTCC
CAAGTCGAAC GCGGCGTGTC ACGCCCGACC GTGGCCGATC TCACAGCCAT CAGCGAAGAG
CTCGGTGTAT CCACAGCCTA CTTCTACAAG CTGGACAAAC CCCGTGAGCT CGACTGGGTG
ACCCGCCCGC ACGAGCGTCG CACGCTGCAC CTGGCGGGTG GTATCACCGA TGTGCTGGCA
TCGCCCTCCA TAACGGGCGC GTTTTCCATG CTCGACAGCC ATTTGCAGCC GGGGGCCAGC
AGTGGCGAGG AGTACCTGGA CGACAGCTCG GAGCAGGGTT GCTTTGTGCT CGAAGGCGAA
CTGACGGTGT GGTTGGGCGA TGCTGAGCCG GTCACGCTGC ACGCCAATGA CAGTTTTCAG
TTGCAACCCC ACGCCCGTTT CCGTTACGCC AACCTGACCG ACAAGCCCAT ACGCGTGCTT
TGGGTGTTCA GCTGA
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| Protein sequence | MKVHEEIEGL AVLIRDLRKF KGLTLGELAQ RIGRSVGFLS QVERGVSRPT VADLTAISEE
LGVSTAYFYK LDKPRELDWV TRPHERRTLH LAGGITDVLA SPSITGAFSM LDSHLQPGAS
SGEEYLDDSS EQGCFVLEGE LTVWLGDAEP VTLHANDSFQ LQPHARFRYA NLTDKPIRVL
WVFS
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