Gene Bphyt_4439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4439 
Symbol 
ID6277979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp503655 
End bp504227 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content61% 
IMG OID642615532 
Producttranscriptional regulator, XRE family 
Protein accessionYP_001888185 
Protein GI187919154 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.957299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACGA CAATTCAAAA AAGCAATCCG GCACTAGAAA TCGGCAGCAA GATCCGCGCG 
CTGCGCCAAC GGCTCAAGCG CACGCTGGAT GACACGGCAA CCGCGGCGGG AATCTCCAAG
CCGTTTTTGT CGCAAGTCGA GCGCGGGCTG GCGTCACCGT CCATTACGTC GTTGGCCGGG
ATCGCTCACG CACTCGGCGT CACGGTGCAG TATTTCGTCG ACACACCCAG CGAGGAACGC
TGTGTGAGCC GGGGCGATCA GTTGAAGTTT TTCGGTTTTG CGGACTCGGC CAATCTGTTT
GCGCGGCTGA CCAACCTGAC GGGCGGCCGT CAGCTCGAAG CGATCCTGGT GAGGATGCCG
CCCGGGCAGA AGCGCTCCGA AGTGACCACG CATGCCGGAG AAGAGTTTGT TTATGTGATC
GACGGCGAAG TGTCGTTGAC GCTGGAAGGC AAGACGTTCG TGTTGCACGC GGGAGACAGC
GCGCATTACG AATCAACGGT GCCGCACAGC TGGGTGAACA CCGCGCGCAT CGAGTCGGTG
GTCGTCTGGG TGGGCACACC GAGACTGTTC TAA
 
Protein sequence
MVTTIQKSNP ALEIGSKIRA LRQRLKRTLD DTATAAGISK PFLSQVERGL ASPSITSLAG 
IAHALGVTVQ YFVDTPSEER CVSRGDQLKF FGFADSANLF ARLTNLTGGR QLEAILVRMP
PGQKRSEVTT HAGEEFVYVI DGEVSLTLEG KTFVLHAGDS AHYESTVPHS WVNTARIESV
VVWVGTPRLF