Gene Bcen2424_5543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5543 
Symbol 
ID4453388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2651558 
End bp2652136 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content63% 
IMG OID639697604 
ProductXRE family transcriptional regulator 
Protein accessionYP_839169 
Protein GI116693636 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.827143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCCCC CCACTGAAAA CTCGCGATCG GCAGACGCTG TCGCACTCGG CAGCAAGATT 
CGCGCGTTGC GCCAACGTCT GAAGCGCACG CTCGACGACA CCGCTACCGC CGCGGGGATT
TCGAAGCCGT TTCTGTCTCA AGTCGAGCGC GGGCTCGCGT CGCCGTCACT GACGTCGCTG
GCCGGTATTG CCCACGCACT CGGCGTGACG GTGCAGTACT TCGTGGATAC GCCGAGCGAG
GAACGCTCGG TGTGCCGAGG CGATCAGTTG CGCTTCTTCG GGTTTGCCGA TTCGGCGAAC
CTGTTCGCGA GGCTGACGAA CGTGTCCGAA GGGCGCCAGC TTGAGGCGAT CCTCGTGAGG
ATGCCGCCGG GGCAGAAACG GTCCGAGGTG ACGACACATG CAGGAGAGGA GTTCCTGTAC
GTGATTGAAG GGGAAGTGTC GCTGACGCTG GAAGGCAAGA CGTTCGTCCT GCAGGCCGGC
GACAGTTCGC ACTATCAGTC GACGGTGCCG CACAGCTGGG TCAACACCGC GAAGATCGAG
TCGGTGGTGG TCTGGGTCGG TACGCCGCGA CTGTTCTAA
 
Protein sequence
MVPPTENSRS ADAVALGSKI RALRQRLKRT LDDTATAAGI SKPFLSQVER GLASPSLTSL 
AGIAHALGVT VQYFVDTPSE ERSVCRGDQL RFFGFADSAN LFARLTNVSE GRQLEAILVR
MPPGQKRSEV TTHAGEEFLY VIEGEVSLTL EGKTFVLQAG DSSHYQSTVP HSWVNTAKIE
SVVVWVGTPR LF