More than 300 homologs were found in PanDaTox collection
for query gene BamMC406_4110 on replicon NC_010552
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010515  Bcenmc03_3304  acyl-CoA dehydrogenase type 2  91.71 
 
 
398 aa  731    Burkholderia cenocepacia MC0-3  Bacteria  normal  0.890764  normal 
 
 
-
 
NC_007511  Bcep18194_B1805  Acyl-CoA dehydrogenase-like  91.21 
 
 
398 aa  725    Burkholderia sp. 383  Bacteria  normal  normal  0.723346 
 
 
-
 
NC_010086  Bmul_4392  acyl-CoA dehydrogenase domain-containing protein  87.44 
 
 
398 aa  707    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4153  Acyl-CoA dehydrogenase, type 2-like  91.71 
 
 
398 aa  731    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.240401  n/a   
 
 
-
 
NC_008391  Bamb_3636  acyl-CoA dehydrogenase type 2  98.74 
 
 
398 aa  802    Burkholderia ambifaria AMMD  Bacteria  normal  0.556701  normal 
 
 
-
 
NC_008543  Bcen2424_4213  acyl-CoA dehydrogenase type 2  91.71 
 
 
398 aa  731    Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.353379 
 
 
-
 
NC_010552  BamMC406_4110  acyl-CoA dehydrogenase type 2  100 
 
 
398 aa  808    Burkholderia ambifaria MC40-6  Bacteria  normal  0.163636  normal 
 
 
-
 
NC_007651  BTH_I0531  acyl-CoA dehydrogenase domain-containing protein  68.3 
 
 
407 aa  527  1e-148  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2197  acyl-CoA dehydrogenase domain-containing protein  67.34 
 
 
407 aa  514  1.0000000000000001e-145  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2888  acyl-CoA dehydrogenase domain-containing protein  67.34 
 
 
407 aa  514  1.0000000000000001e-145  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0042  acyl-CoA dehydrogenase domain-containing protein  67.34 
 
 
407 aa  514  1.0000000000000001e-145  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0818  acyl-CoA dehydrogenase domain-containing protein  67.59 
 
 
407 aa  516  1.0000000000000001e-145  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0655  acyl-CoA dehydrogenase domain-containing protein  67.59 
 
 
407 aa  516  1.0000000000000001e-145  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0641  acyl-CoA dehydrogenase domain-containing protein  67.59 
 
 
407 aa  516  1.0000000000000001e-145  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2510  acyl-CoA dehydrogenase domain-containing protein  67.34 
 
 
407 aa  514  1.0000000000000001e-145  Burkholderia mallei NCTC 10247  Bacteria  normal  0.10491  n/a   
 
 
-
 
NC_010681  Bphyt_1718  acyl-CoA dehydrogenase domain protein  58.38 
 
 
428 aa  438  9.999999999999999e-123  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2526  putative acyl-CoA dehydrogenase  58.58 
 
 
425 aa  436  1e-121  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0280993 
 
 
-
 
NC_007974  Rmet_5837  acyl-CoA dehydrogenase-like protein  56.91 
 
 
400 aa  414  1e-114  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5361  putative acyl-CoA dehydrogenase  55.59 
 
 
402 aa  410  1e-113  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3795  acyl-CoA dehydrogenase domain protein  50.94 
 
 
393 aa  377  1e-103  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.00013086  normal  0.344818 
 
 
-
 
NC_012850  Rleg_4124  acyl-CoA dehydrogenase domain protein  50.4 
 
 
393 aa  374  1e-102  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.993047 
 
 
-
 
NC_009667  Oant_1476  acyl-CoA dehydrogenase protein  47.62 
 
 
390 aa  372  1e-102  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0185  acyl-CoA dehydrogenase domain-containing protein  51.27 
 
 
387 aa  353  2.9999999999999997e-96  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_6022  acyl-CoA dehydrogenase  46.37 
 
 
399 aa  342  7e-93  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4418  acyl-CoA dehydrogenase domain protein  47.09 
 
 
402 aa  321  9.999999999999999e-87  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.584473  n/a   
 
 
-
 
NC_007912  Sde_0166  putative carnitine operon oxidoreductase  43.05 
 
 
395 aa  311  1e-83  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3403  acyl-CoA dehydrogenase type 2  46.54 
 
 
409 aa  308  8e-83  Methylobacterium sp. 4-46  Bacteria  normal  0.0408106  normal  0.104533 
 
 
-
 
NC_010172  Mext_4597  acyl-CoA dehydrogenase domain-containing protein  44.63 
 
 
400 aa  299  7e-80  Methylobacterium extorquens PA1  Bacteria  normal  0.419077  normal  0.111113 
 
 
-
 
NC_011757  Mchl_5058  acyl-CoA dehydrogenase domain protein  44.07 
 
 
400 aa  290  2e-77  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.418777 
 
 
-
 
NC_007958  RPD_1095  acyl-CoA dehydrogenase-like  42.42 
 
 
408 aa  287  2e-76  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0992  Acyl-CoA dehydrogenase-like  42.11 
 
 
408 aa  269  5.9999999999999995e-71  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.297365 
 
 
-
 
NC_011004  Rpal_5079  Acyl-CoA dehydrogenase type 2 domain  42.47 
 
 
409 aa  267  2e-70  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1077  acyl-CoA dehydrogenase domain protein  41.46 
 
 
385 aa  250  2e-65  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0683  acyl-CoA dehydrogenase type 2  31.61 
 
 
385 aa  139  1e-31  Salinispora tropica CNB-440  Bacteria  normal  0.998366  normal 
 
 
-
 
NC_009953  Sare_3056  acyl-CoA dehydrogenase domain-containing protein  32.79 
 
 
390 aa  138  2e-31  Salinispora arenicola CNS-205  Bacteria  normal  0.432663  hitchhiker  0.00291671 
 
 
-
 
NC_014150  Bmur_2643  acyl-CoA dehydrogenase domain protein  24.06 
 
 
371 aa  97.4  4e-19  Brachyspira murdochii DSM 12563  Bacteria  normal  0.475979  n/a   
 
 
-
 
NC_010338  Caul_2948  acyl-CoA dehydrogenase domain-containing protein  24.48 
 
 
416 aa  86.3  8e-16  Caulobacter sp. K31  Bacteria  normal  0.0471344  normal 
 
 
-
 
NC_008726  Mvan_5885  acyl-CoA dehydrogenase domain-containing protein  27 
 
 
375 aa  80.5  0.00000000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.468713 
 
 
-
 
NC_010322  PputGB1_2538  acyl-CoA dehydrogenase type 2  26.65 
 
 
378 aa  79  0.0000000000002  Pseudomonas putida GB-1  Bacteria  normal  0.844573  decreased coverage  0.00557828 
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  22.13 
 
 
377 aa  77.4  0.0000000000005  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  30.08 
 
 
387 aa  75.5  0.000000000002  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_008726  Mvan_1977  butyryl-CoA dehydrogenase  27.01 
 
 
397 aa  75.1  0.000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1759  acyl-CoA dehydrogenase-like protein  27.42 
 
 
397 aa  74.7  0.000000000003  Mycobacterium sp. MCS  Bacteria  normal  0.218239  n/a   
 
 
-
 
NC_009077  Mjls_1740  acyl-CoA dehydrogenase domain-containing protein  27.42 
 
 
397 aa  74.7  0.000000000003  Mycobacterium sp. JLS  Bacteria  normal  0.0177648  normal 
 
 
-
 
NC_008705  Mkms_1806  acyl-CoA dehydrogenase domain-containing protein  27.42 
 
 
397 aa  74.7  0.000000000003  Mycobacterium sp. KMS  Bacteria  normal  normal  0.580831 
 
 
-
 
NC_002947  PP_3226  acyl-CoA dehydrogenase-related protein  25.83 
 
 
380 aa  74.3  0.000000000004  Pseudomonas putida KT2440  Bacteria  normal  0.690171  normal 
 
 
-
 
NC_005957  BT9727_2327  acyl-CoA dehydrogenase  22.29 
 
 
381 aa  73.2  0.000000000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2560  acyl-CoA dehydrogenase  22.29 
 
 
381 aa  73.2  0.000000000007  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.1486499999999994e-20 
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  23.7 
 
 
380 aa  73.2  0.000000000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  22.16 
 
 
380 aa  72.8  0.000000000009  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2548  acyl-CoA dehydrogenase  22.41 
 
 
381 aa  72.4  0.00000000001  Bacillus cereus ATCC 10987  Bacteria  normal  0.438014  n/a   
 
 
-
 
NC_006274  BCZK2285  acyl-CoA dehydrogenase  22.41 
 
 
381 aa  72.4  0.00000000001  Bacillus cereus E33L  Bacteria  normal  0.769883  n/a   
 
 
-
 
NC_011725  BCB4264_A2511  acyl-CoA dehydrogenase  22.41 
 
 
381 aa  72.8  0.00000000001  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6601  Acyl-CoA dehydrogenase-like protein  24.66 
 
 
425 aa  72.4  0.00000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0223249  normal  0.275726 
 
 
-
 
NC_011658  BCAH187_A2603  acyl-CoA dehydrogenase  22.41 
 
 
381 aa  72.4  0.00000000001  Bacillus cereus AH187  Bacteria  normal  0.608519  n/a   
 
 
-
 
NC_011772  BCG9842_B2812  acyl-CoA dehydrogenase  22.41 
 
 
381 aa  72.8  0.00000000001  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000163693 
 
 
-
 
NC_009338  Mflv_4367  butyryl-CoA dehydrogenase  27.08 
 
 
397 aa  71.6  0.00000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11696  acyl-CoA dehydrogenase fadE16  26.04 
 
 
373 aa  71.2  0.00000000003  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.392207 
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  29.63 
 
 
387 aa  70.9  0.00000000004  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_005945  BAS2369  acyl-CoA dehydrogenase  22.13 
 
 
381 aa  70.5  0.00000000005  Bacillus anthracis str. Sterne  Bacteria  normal  0.73982  n/a   
 
 
-
 
NC_009714  CHAB381_1168  putative acyl-coa dehydrogenase  24.61 
 
 
372 aa  70.5  0.00000000005  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  23.26 
 
 
381 aa  69.7  0.00000000008  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_013947  Snas_0146  Acyl-CoA dehydrogenase type 2 domain-containing protein  29.29 
 
 
382 aa  69.3  0.0000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.658373 
 
 
-
 
NC_007530  GBAA_2547  acyl-CoA dehydrogenase  21.84 
 
 
381 aa  68.9  0.0000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1802  acyl-CoA dehydrogenase domain-containing protein  21.73 
 
 
381 aa  68.6  0.0000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2547  Acyl-CoA dehydrogenase type 2 domain protein  25.2 
 
 
392 aa  67.4  0.0000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013510  Tcur_1390  Acyl-CoA dehydrogenase type 2 domain protein  26.42 
 
 
384 aa  67.8  0.0000000004  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_013441  Gbro_1523  acyl-CoA dehydrogenase domain protein  26.74 
 
 
397 aa  67  0.0000000006  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0413288  n/a   
 
 
-
 
NC_013159  Svir_20400  acyl-CoA dehydrogenase  29.21 
 
 
396 aa  66.6  0.0000000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.170444  normal 
 
 
-
 
NC_009485  BBta_4293  putative Acyl-CoA dehydrogenase  24.02 
 
 
398 aa  66.2  0.0000000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  hitchhiker  0.004124 
 
 
-
 
NC_013757  Gobs_1139  acyl-CoA dehydrogenase domain protein  24.4 
 
 
399 aa  66.2  0.000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  26.61 
 
 
382 aa  65.1  0.000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  21.91 
 
 
379 aa  65.5  0.000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_009921  Franean1_4395  acyl-CoA dehydrogenase type 2  25.74 
 
 
434 aa  65.1  0.000000002  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  22.5 
 
 
380 aa  65.5  0.000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1173  Acyl-CoA dehydrogenase type 2 domain protein  26.88 
 
 
383 aa  64.3  0.000000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2093  acyl-CoA dehydrogenase domain-containing protein  25.63 
 
 
398 aa  64.3  0.000000004  Thermobispora bispora DSM 43833  Bacteria  normal  0.0300334  normal  0.0497691 
 
 
-
 
NC_013525  Tter_1183  Acyl-CoA dehydrogenase type 2 domain protein  22.63 
 
 
390 aa  63.5  0.000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  21.1 
 
 
379 aa  63.5  0.000000006  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_1175  acyl-CoA dehydrogenase domain protein  22.25 
 
 
381 aa  62.4  0.00000001  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013743  Htur_0919  acyl-CoA dehydrogenase domain protein  22.6 
 
 
383 aa  62.4  0.00000001  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009953  Sare_0673  acyl-CoA dehydrogenase domain-containing protein  24.19 
 
 
400 aa  61.6  0.00000002  Salinispora arenicola CNS-205  Bacteria  normal  0.514226  normal 
 
 
-
 
NC_013595  Sros_6335  acyl-CoA dehydrogenase domain protein  23.85 
 
 
386 aa  62  0.00000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0389315  normal  0.725662 
 
 
-
 
NC_007794  Saro_1645  isovaleryl-CoA dehydrogenase  20.71 
 
 
387 aa  61.6  0.00000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1952  Acyl-CoA dehydrogenase type 2 domain protein  26.22 
 
 
387 aa  62  0.00000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0727  acyl-CoA dehydrogenase domain-containing protein  24.73 
 
 
398 aa  61.6  0.00000002  Salinispora tropica CNB-440  Bacteria  normal  normal  0.230975 
 
 
-
 
NC_013216  Dtox_1697  acyl-CoA dehydrogenase domain protein  22.91 
 
 
386 aa  61.2  0.00000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0868604  normal 
 
 
-
 
NC_007777  Francci3_2167  butyryl-CoA dehydrogenase  26.09 
 
 
399 aa  61.2  0.00000003  Frankia sp. CcI3  Bacteria  normal  0.592182  normal  0.710802 
 
 
-
 
NC_008688  Pden_5014  acyl-CoA dehydrogenase type 2  26.74 
 
 
384 aa  61.2  0.00000003  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2163  acyl-CoA dehydrogenase type 2  23.1 
 
 
395 aa  60.8  0.00000004  Pseudomonas putida GB-1  Bacteria  normal  0.893753  normal  0.219871 
 
 
-
 
NC_013744  Htur_4358  acyl-CoA dehydrogenase domain protein  22.41 
 
 
381 aa  60.5  0.00000005  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0892384  n/a   
 
 
-
 
NC_013922  Nmag_2307  acyl-CoA dehydrogenase domain protein  24.38 
 
 
381 aa  59.7  0.00000008  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2881  acyl-CoA dehydrogenase type 2  22.56 
 
 
382 aa  59.7  0.00000008  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.255861  n/a   
 
 
-
 
NC_009485  BBta_1981  putative acyl-CoA dehydrogenase  25.28 
 
 
388 aa  59.3  0.0000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  21.67 
 
 
389 aa  58.9  0.0000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1723  acyl-CoA dehydrogenase type 2 domain protein  27.12 
 
 
382 aa  59.3  0.0000001  Jonesia denitrificans DSM 20603  Bacteria  normal  0.113771  normal 
 
 
-
 
NC_008786  Veis_1333  acyl-CoA dehydrogenase domain-containing protein  27.65 
 
 
396 aa  59.3  0.0000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0832215  hitchhiker  0.00420458 
 
 
-
 
NC_013131  Caci_7768  acyl-CoA dehydrogenase domain protein  24.52 
 
 
397 aa  59.3  0.0000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2430  acyl-CoA dehydrogenase-like  24.93 
 
 
385 aa  58.5  0.0000002  Frankia sp. CcI3  Bacteria  decreased coverage  0.000440313  normal  0.478447 
 
 
-
 
NC_007953  Bxe_C0247  Acyl-CoA dehydrogenase  26.37 
 
 
378 aa  58.5  0.0000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
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