More than 300 homologs were found in PanDaTox collection
for query gene Strop_2624 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009953  Sare_2822  acyl-CoA dehydrogenase domain-containing protein  84.76 
 
 
750 aa  1168    Salinispora arenicola CNS-205  Bacteria  normal  0.42354  normal  0.0371464 
 
 
-
 
NC_009380  Strop_2624  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
751 aa  1480    Salinispora tropica CNB-440  Bacteria  normal  0.487043  normal  0.289465 
 
 
-
 
NC_009077  Mjls_5097  acyl-CoA dehydrogenase domain-containing protein  47.88 
 
 
717 aa  570  1e-161  Mycobacterium sp. JLS  Bacteria  normal  normal  0.167108 
 
 
-
 
NC_009338  Mflv_1460  acyl-CoA dehydrogenase domain-containing protein  47.45 
 
 
718 aa  567  1e-160  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4712  acyl-CoA dehydrogenase-like protein  47.88 
 
 
717 aa  568  1e-160  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4798  acyl-CoA dehydrogenase domain-containing protein  47.88 
 
 
717 aa  568  1e-160  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5311  acyl-CoA dehydrogenase domain-containing protein  48.14 
 
 
716 aa  564  1.0000000000000001e-159  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.17244 
 
 
-
 
NC_013510  Tcur_3998  acyl-CoA dehydrogenase domain protein  44.43 
 
 
734 aa  551  1e-155  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0183743  n/a   
 
 
-
 
NC_013441  Gbro_0882  acyl-CoA dehydrogenase domain protein  47.17 
 
 
726 aa  535  1e-150  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13606  acyl-CoA dehydrogenase fadE34  47.88 
 
 
711 aa  533  1e-150  Mycobacterium tuberculosis F11  Bacteria  normal  0.65257  normal  0.531914 
 
 
-
 
NC_013510  Tcur_2177  acyl-CoA dehydrogenase domain protein  42.31 
 
 
732 aa  531  1e-149  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00000163847  n/a   
 
 
-
 
NC_008699  Noca_2795  acyl-CoA dehydrogenase domain-containing protein  47.07 
 
 
684 aa  531  1e-149  Nocardioides sp. JS614  Bacteria  normal  0.67003  n/a   
 
 
-
 
NC_013131  Caci_2148  acyl-CoA dehydrogenase domain protein  45.73 
 
 
725 aa  522  1e-147  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3797  acyl-CoA dehydrogenase domain protein  48.48 
 
 
694 aa  519  1.0000000000000001e-145  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0801  acyl-CoA dehydrogenase domain-containing protein  42.08 
 
 
736 aa  509  9.999999999999999e-143  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3494  acyl-CoA dehydrogenase domain protein  45.05 
 
 
739 aa  500  1e-140  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1467  Acyl-CoA dehydrogenase-like protein  41.72 
 
 
733 aa  487  1e-136  Streptosporangium roseum DSM 43021  Bacteria  normal  0.859778  normal  0.817011 
 
 
-
 
NC_008146  Mmcs_0366  acyl-CoA dehydrogenase-like protein  39.1 
 
 
730 aa  455  1.0000000000000001e-126  Mycobacterium sp. MCS  Bacteria  normal  0.235849  n/a   
 
 
-
 
NC_009077  Mjls_0355  acyl-CoA dehydrogenase domain-containing protein  39.1 
 
 
730 aa  455  1.0000000000000001e-126  Mycobacterium sp. JLS  Bacteria  normal  0.353074  normal 
 
 
-
 
NC_008705  Mkms_0376  acyl-CoA dehydrogenase domain-containing protein  39.1 
 
 
730 aa  455  1.0000000000000001e-126  Mycobacterium sp. KMS  Bacteria  normal  0.262889  normal 
 
 
-
 
NC_009077  Mjls_0190  acyl-CoA dehydrogenase domain-containing protein  42.25 
 
 
722 aa  454  1.0000000000000001e-126  Mycobacterium sp. JLS  Bacteria  normal  normal  0.353151 
 
 
-
 
NC_008146  Mmcs_0201  acyl-CoA dehydrogenase-like protein  41.84 
 
 
722 aa  447  1.0000000000000001e-124  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0210  acyl-CoA dehydrogenase domain-containing protein  41.84 
 
 
722 aa  447  1.0000000000000001e-124  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0403  acyl-CoA dehydrogenase domain-containing protein  38.18 
 
 
737 aa  447  1.0000000000000001e-124  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0335  acyl-CoA dehydrogenase domain-containing protein  37.78 
 
 
728 aa  444  1e-123  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0040  acyl-CoA dehydrogenase-like protein  38.96 
 
 
738 aa  439  9.999999999999999e-123  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0049  acyl-CoA dehydrogenase domain-containing protein  38.96 
 
 
738 aa  439  9.999999999999999e-123  Mycobacterium sp. KMS  Bacteria  normal  0.138566  normal  0.0651954 
 
 
-
 
NC_009077  Mjls_0030  acyl-CoA dehydrogenase domain-containing protein  38.96 
 
 
738 aa  433  1e-120  Mycobacterium sp. JLS  Bacteria  normal  normal  0.327823 
 
 
-
 
NC_009565  TBFG_10275  acyl-CoA dehydrogenase fadE6  37.93 
 
 
731 aa  433  1e-120  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0482205 
 
 
-
 
NC_008726  Mvan_4270  acyl-CoA dehydrogenase domain-containing protein  38.59 
 
 
740 aa  432  1e-119  Mycobacterium vanbaalenii PYR-1  Bacteria  decreased coverage  0.008368  normal  0.652694 
 
 
-
 
NC_013510  Tcur_2603  acyl-CoA dehydrogenase domain protein  41.83 
 
 
719 aa  427  1e-118  Thermomonospora curvata DSM 43183  Bacteria  normal  0.035645  n/a   
 
 
-
 
NC_013595  Sros_6713  Acyl-CoA dehydrogenase-like protein  49.91 
 
 
744 aa  425  1e-117  Streptosporangium roseum DSM 43021  Bacteria  normal  0.289113  normal  0.281332 
 
 
-
 
NC_009077  Mjls_4022  acyl-CoA dehydrogenase domain-containing protein  39.19 
 
 
716 aa  416  1e-114  Mycobacterium sp. JLS  Bacteria  normal  normal  0.98053 
 
 
-
 
NC_009565  TBFG_13078  acyl-CoA dehydrogenase fadE22  38.99 
 
 
721 aa  410  1e-113  Mycobacterium tuberculosis F11  Bacteria  normal  0.273933  normal 
 
 
-
 
NC_009338  Mflv_0441  acyl-CoA dehydrogenase domain-containing protein  38.87 
 
 
729 aa  405  1e-111  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.56016  normal  0.716089 
 
 
-
 
NC_009338  Mflv_2376  acyl-CoA dehydrogenase domain-containing protein  36.66 
 
 
745 aa  402  9.999999999999999e-111  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.67767  normal 
 
 
-
 
NC_008726  Mvan_0226  acyl-CoA dehydrogenase domain-containing protein  39.42 
 
 
733 aa  402  9.999999999999999e-111  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.25373 
 
 
-
 
NC_013739  Cwoe_0960  acyl-CoA dehydrogenase domain protein  43.32 
 
 
378 aa  255  3e-66  Conexibacter woesei DSM 14684  Bacteria  normal  0.489478  normal 
 
 
-
 
NC_008699  Noca_0803  acyl-CoA dehydrogenase domain-containing protein  45.82 
 
 
378 aa  251  3e-65  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2813  acyl-CoA dehydrogenase domain-containing protein  44.61 
 
 
380 aa  230  7e-59  Salinispora tropica CNB-440  Bacteria  normal  0.249465  normal 
 
 
-
 
NC_007953  Bxe_C0701  putative acyl-CoA dehydrogenase  39.58 
 
 
397 aa  228  3e-58  Burkholderia xenovorans LB400  Bacteria  normal  0.249551  normal  0.786004 
 
 
-
 
NC_012791  Vapar_1314  acyl-CoA dehydrogenase domain protein  30.28 
 
 
775 aa  227  6e-58  Variovorax paradoxus S110  Bacteria  normal  0.788879  n/a   
 
 
-
 
NC_013595  Sros_2091  acyl-CoA dehydrogenase domain-containing protein  39.88 
 
 
381 aa  221  5e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1475  acyl-CoA dehydrogenase domain protein  44.1 
 
 
397 aa  219  1e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0513972  n/a   
 
 
-
 
NC_007333  Tfu_2309  putative acyl-CoA dehydrogenase  40.66 
 
 
411 aa  219  2e-55  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3342  acyl-CoA dehydrogenase domain protein  39.71 
 
 
393 aa  218  2e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1688  Acyl-CoA dehydrogenase-like  36.86 
 
 
415 aa  218  2.9999999999999998e-55  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.78575  normal  0.535517 
 
 
-
 
CP001800  Ssol_0320  acyl-CoA dehydrogenase domain protein  36.66 
 
 
370 aa  215  1.9999999999999998e-54  Sulfolobus solfataricus 98/2  Archaea  normal  0.25734  n/a   
 
 
-
 
NC_007958  RPD_3605  acyl-CoA dehydrogenase-like  35.82 
 
 
415 aa  216  1.9999999999999998e-54  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.75816  normal 
 
 
-
 
NC_014158  Tpau_3838  acyl-CoA dehydrogenase domain protein  41.48 
 
 
385 aa  215  2.9999999999999995e-54  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2909  acyl-CoA dehydrogenase domain-containing protein  42.99 
 
 
396 aa  214  3.9999999999999995e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.25619  normal  0.0238889 
 
 
-
 
NC_009077  Mjls_4137  acyl-CoA dehydrogenase domain-containing protein  41.07 
 
 
381 aa  214  4.9999999999999996e-54  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2706  acyl-CoA dehydrogenase domain protein  38.86 
 
 
383 aa  213  7e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0953492  n/a   
 
 
-
 
NC_009719  Plav_1032  acyl-CoA dehydrogenase domain-containing protein  38.81 
 
 
411 aa  213  1e-53  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.605452  normal 
 
 
-
 
NC_014165  Tbis_2698  acyl-CoA dehydrogenase domain-containing protein  41.6 
 
 
390 aa  212  2e-53  Thermobispora bispora DSM 43833  Bacteria  normal  0.96365  normal  0.79248 
 
 
-
 
NC_011004  Rpal_1909  acyl-CoA dehydrogenase domain protein  35.31 
 
 
415 aa  212  2e-53  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.337795  n/a   
 
 
-
 
NC_013595  Sros_7781  acyl-CoA dehydrogenase domain-containing protein  43.98 
 
 
395 aa  212  3e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4096  acyl-CoA dehydrogenase domain-containing protein  41.26 
 
 
396 aa  212  3e-53  Mycobacterium sp. JLS  Bacteria  normal  0.0624184  normal 
 
 
-
 
NC_009485  BBta_7117  putative acyl-CoA dehydrogenase  35.79 
 
 
414 aa  209  2e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.691802 
 
 
-
 
NC_013131  Caci_1155  acyl-CoA dehydrogenase domain protein  43 
 
 
396 aa  208  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13595  acyl-CoA dehydrogenase fadE31  40.84 
 
 
377 aa  208  3e-52  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.000120639  normal  0.258893 
 
 
-
 
NC_009656  PSPA7_4361  acyl-CoA dehydrogenase  37.61 
 
 
381 aa  208  4e-52  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3426  acyl-CoA dehydrogenase domain-containing protein  38.01 
 
 
407 aa  207  5e-52  Caulobacter sp. K31  Bacteria  normal  0.751929  normal  0.216447 
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  38.04 
 
 
396 aa  207  6e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_009511  Swit_3633  acyl-CoA dehydrogenase domain-containing protein  39.77 
 
 
393 aa  207  7e-52  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.752817 
 
 
-
 
NC_009485  BBta_7116  putative acyl-CoA dehydrogenase  34.66 
 
 
415 aa  206  1e-51  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1910  acyl-CoA dehydrogenase domain protein  34.02 
 
 
414 aa  206  2e-51  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1689  Acyl-CoA dehydrogenase-like  33.76 
 
 
415 aa  205  3e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.777163 
 
 
-
 
NC_014158  Tpau_1861  acyl-CoA dehydrogenase domain protein  43.93 
 
 
395 aa  204  4e-51  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2615  acyl-CoA dehydrogenase domain-containing protein  40.76 
 
 
386 aa  204  5e-51  Salinispora tropica CNB-440  Bacteria  normal  0.766837  normal 
 
 
-
 
NC_009719  Plav_0965  acyl-CoA dehydrogenase domain-containing protein  35.63 
 
 
409 aa  204  6e-51  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  36.47 
 
 
396 aa  202  9.999999999999999e-51  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  36.75 
 
 
396 aa  203  9.999999999999999e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_009921  Franean1_4582  acyl-CoA dehydrogenase domain-containing protein  36.9 
 
 
418 aa  203  9.999999999999999e-51  Frankia sp. EAN1pec  Bacteria  normal  0.770197  normal  0.671641 
 
 
-
 
NC_013510  Tcur_4613  acyl-CoA dehydrogenase domain protein  38.17 
 
 
394 aa  202  1.9999999999999998e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3604  acyl-CoA dehydrogenase-like  34.87 
 
 
414 aa  202  1.9999999999999998e-50  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0502899  normal 
 
 
-
 
NC_008463  PA14_51100  acyl-CoA dehydrogenase  36.12 
 
 
381 aa  202  1.9999999999999998e-50  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.28895  decreased coverage  0.000000076859 
 
 
-
 
NC_009511  Swit_3397  acyl-CoA dehydrogenase domain-containing protein  40 
 
 
403 aa  201  3.9999999999999996e-50  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.00717177  decreased coverage  0.00584794 
 
 
-
 
NC_008048  Sala_1632  acyl-CoA dehydrogenase-like protein  38.72 
 
 
407 aa  200  9e-50  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0101171  normal 
 
 
-
 
NC_013131  Caci_1366  acyl-CoA dehydrogenase domain protein  39.19 
 
 
380 aa  200  9e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.696625 
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  41.36 
 
 
385 aa  199  2.0000000000000003e-49  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  36.47 
 
 
396 aa  199  2.0000000000000003e-49  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010333  Caul_5300  acyl-CoA dehydrogenase domain-containing protein  37.74 
 
 
402 aa  199  2.0000000000000003e-49  Caulobacter sp. K31  Bacteria  normal  normal  0.712748 
 
 
-
 
NC_008786  Veis_2008  acyl-CoA dehydrogenase domain-containing protein  30.31 
 
 
833 aa  199  2.0000000000000003e-49  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.773218 
 
 
-
 
NC_008726  Mvan_5287  acyl-CoA dehydrogenase domain-containing protein  38.74 
 
 
374 aa  199  2.0000000000000003e-49  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.66157  normal  0.272331 
 
 
-
 
NC_013159  Svir_16750  acyl-CoA dehydrogenase  44.12 
 
 
403 aa  199  2.0000000000000003e-49  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.73205  normal 
 
 
-
 
NC_009511  Swit_1604  acyl-CoA dehydrogenase domain-containing protein  38.87 
 
 
432 aa  198  3e-49  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3835  acyl-CoA dehydrogenase domain protein  39.58 
 
 
382 aa  197  7e-49  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6825  dehydrogenase family protein  37.43 
 
 
393 aa  196  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.178037 
 
 
-
 
NC_010338  Caul_1447  acyl-CoA dehydrogenase domain-containing protein  35.7 
 
 
401 aa  196  2e-48  Caulobacter sp. K31  Bacteria  normal  normal  0.0993289 
 
 
-
 
NC_007925  RPC_2198  acyl-CoA dehydrogenase-like  35.86 
 
 
413 aa  196  2e-48  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.659729  normal 
 
 
-
 
NC_008048  Sala_1246  acyl-CoA dehydrogenase-like protein  34.79 
 
 
384 aa  194  5e-48  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.235066  normal 
 
 
-
 
NC_009953  Sare_2814  acyl-CoA dehydrogenase domain-containing protein  39.88 
 
 
386 aa  194  7e-48  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00382252 
 
 
-
 
NC_009338  Mflv_2287  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
385 aa  193  9e-48  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1636  acyl-CoA dehydrogenase-like protein  37.33 
 
 
401 aa  193  1e-47  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.552524 
 
 
-
 
NC_008146  Mmcs_4695  acyl-CoA dehydrogenase-like protein  38.76 
 
 
389 aa  193  1e-47  Mycobacterium sp. MCS  Bacteria  normal  0.0252616  n/a   
 
 
-
 
NC_008705  Mkms_4781  acyl-CoA dehydrogenase domain-containing protein  38.76 
 
 
389 aa  193  1e-47  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4379  acyl-CoA dehydrogenase domain-containing protein  35.31 
 
 
385 aa  192  2e-47  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.627573  normal 
 
 
-
 
NC_013739  Cwoe_0736  acyl-CoA dehydrogenase domain protein  38.39 
 
 
403 aa  191  4e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.453117  normal 
 
 
-
 
NC_009901  Spea_2176  acyl-CoA dehydrogenase domain-containing protein  34.47 
 
 
396 aa  191  5e-47  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
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