115 homologs were found in PanDaTox collection
for query gene Smed_0353 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009636  Smed_0353  protein of unknown function DUF899 thioredoxin family protein  100 
 
 
255 aa  526  1e-148  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00646248  normal  0.96044 
 
 
-
 
NC_007651  BTH_I2055  hypothetical protein  72.11 
 
 
254 aa  383  1e-105  Burkholderia thailandensis E264  Bacteria  normal  0.478815  n/a   
 
 
-
 
NC_010676  Bphyt_4116  protein of unknown function DUF899 thioredoxin family protein  70.47 
 
 
255 aa  382  1e-105  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6459  hypothetical protein  71.31 
 
 
253 aa  375  1e-103  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335869  normal  0.619063 
 
 
-
 
NC_007952  Bxe_B0544  hypothetical protein  68.5 
 
 
255 aa  372  1e-102  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.457717 
 
 
-
 
NC_007953  Bxe_C0023  hypothetical protein  70.52 
 
 
253 aa  374  1e-102  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.428755 
 
 
-
 
NC_008009  Acid345_1332  protein of unknown function DUF899, thioredoxin-like  69.53 
 
 
272 aa  372  1e-102  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_2551  hypothetical protein  70.52 
 
 
254 aa  369  1e-101  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2026  protein of unknown function DUF899, thioredoxin family protein  69.69 
 
 
254 aa  370  1e-101  Burkholderia ambifaria AMMD  Bacteria  normal  0.517928  n/a   
 
 
-
 
NC_009074  BURPS668_2407  hypothetical protein  70.52 
 
 
254 aa  369  1e-101  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2459  hypothetical protein  70.52 
 
 
254 aa  368  1e-101  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0588117  n/a   
 
 
-
 
NC_010551  BamMC406_1895  protein of unknown function DUF899 thioredoxin family protein  70.08 
 
 
254 aa  369  1e-101  Burkholderia ambifaria MC40-6  Bacteria  normal  0.814935  normal 
 
 
-
 
NC_006348  BMA1526  hypothetical protein  70.12 
 
 
254 aa  365  1e-100  Burkholderia mallei ATCC 23344  Bacteria  normal  0.153792  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2026  hypothetical protein  70.12 
 
 
254 aa  365  1e-100  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3286  hypothetical protein  70.12 
 
 
254 aa  365  1e-100  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0189775  n/a   
 
 
-
 
NC_009080  BMA10247_1297  hypothetical protein  70.12 
 
 
254 aa  365  1e-100  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_2342  protein of unknown function DUF899 thioredoxin family protein  69.32 
 
 
265 aa  363  1e-99  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.140568 
 
 
-
 
NC_008062  Bcen_6084  protein of unknown function DUF899, thioredoxin-like  68.11 
 
 
254 aa  363  2e-99  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.766101  n/a   
 
 
-
 
NC_008542  Bcen2424_1993  protein of unknown function DUF899, thioredoxin family protein  68.11 
 
 
254 aa  363  2e-99  Burkholderia cenocepacia HI2424  Bacteria  normal  0.255854  n/a   
 
 
-
 
NC_010508  Bcenmc03_2013  protein of unknown function DUF899 thioredoxin family protein  68.11 
 
 
254 aa  363  2e-99  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0767296  normal 
 
 
-
 
NC_010682  Rpic_1313  protein of unknown function DUF899 thioredoxin family protein  66.14 
 
 
256 aa  363  2e-99  Ralstonia pickettii 12J  Bacteria  normal  normal  0.603997 
 
 
-
 
NC_012856  Rpic12D_1377  protein of unknown function DUF899 thioredoxin family protein  66.54 
 
 
256 aa  361  5.0000000000000005e-99  Ralstonia pickettii 12D  Bacteria  normal  0.349929  normal 
 
 
-
 
NC_007510  Bcep18194_A5303  protein of unknown function DUF899, thioredoxin-like  67.72 
 
 
254 aa  359  2e-98  Burkholderia sp. 383  Bacteria  normal  0.789513  normal  0.132054 
 
 
-
 
NC_012850  Rleg_2672  protein of unknown function DUF899 thioredoxin family protein  67.8 
 
 
265 aa  360  2e-98  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.087051  normal 
 
 
-
 
NC_010625  Bphy_6464  protein of unknown function DUF899 thioredoxin family protein  69.17 
 
 
256 aa  359  3e-98  Burkholderia phymatum STM815  Bacteria  normal  normal  0.586164 
 
 
-
 
NC_010084  Bmul_1283  protein of unknown function DUF899 thioredoxin family protein  66.4 
 
 
254 aa  355  5.999999999999999e-97  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0515883  normal  0.391418 
 
 
-
 
NC_007974  Rmet_5691  Thioredoxin-(TRX) like protein  68.25 
 
 
257 aa  335  5e-91  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0616  protein of unknown function DUF899 thioredoxin family protein  54.22 
 
 
244 aa  258  6e-68  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4488  protein of unknown function DUF899, thioredoxin family protein  50 
 
 
246 aa  241  7e-63  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.394996 
 
 
-
 
NC_003295  RSc1113  hypothetical protein  47.24 
 
 
244 aa  230  2e-59  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000287552  normal  0.212062 
 
 
-
 
NC_012856  Rpic12D_1052  protein of unknown function DUF899 thioredoxin family protein  46.46 
 
 
244 aa  228  6e-59  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.0000759433  normal  0.0411864 
 
 
-
 
NC_009668  Oant_3485  protein of unknown function DUF899 thioredoxin family protein  49.8 
 
 
241 aa  227  1e-58  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.895959  n/a   
 
 
-
 
NC_010682  Rpic_0955  protein of unknown function DUF899 thioredoxin family protein  45.49 
 
 
255 aa  224  1e-57  Ralstonia pickettii 12J  Bacteria  decreased coverage  0.000224117  normal  0.0204099 
 
 
-
 
NC_012850  Rleg_0929  protein of unknown function DUF899 thioredoxin family protein  48.58 
 
 
242 aa  221  9e-57  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.312824  normal  0.683768 
 
 
-
 
NC_011369  Rleg2_0816  protein of unknown function DUF899 thioredoxin family protein  46.96 
 
 
242 aa  219  3.9999999999999997e-56  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00565144  normal  0.265134 
 
 
-
 
NC_007948  Bpro_1368  protein of unknown function DUF899, thioredoxin-like  44.09 
 
 
273 aa  218  8.999999999999998e-56  Polaromonas sp. JS666  Bacteria  normal  normal  0.836068 
 
 
-
 
NC_008254  Meso_0994  protein of unknown function DUF899, thioredoxin-like  48.61 
 
 
230 aa  216  2e-55  Chelativorans sp. BNC1  Bacteria  normal  0.617473  n/a   
 
 
-
 
NC_008463  PA14_46820  hypothetical protein  46.06 
 
 
249 aa  216  2e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0659228  decreased coverage  0.000000227534 
 
 
-
 
NC_009668  Oant_4055  protein of unknown function DUF899 thioredoxin family protein  47.43 
 
 
236 aa  216  2.9999999999999998e-55  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1526  protein of unknown function DUF899 thioredoxin family protein  46.27 
 
 
245 aa  216  2.9999999999999998e-55  Burkholderia phytofirmans PsJN  Bacteria  normal  0.899756  normal 
 
 
-
 
NC_010338  Caul_2485  protein of unknown function DUF899 thioredoxin family protein  47.24 
 
 
245 aa  216  4e-55  Caulobacter sp. K31  Bacteria  normal  0.267783  normal 
 
 
-
 
NC_010622  Bphy_1818  protein of unknown function DUF899 thioredoxin family protein  44.62 
 
 
258 aa  215  5e-55  Burkholderia phymatum STM815  Bacteria  normal  normal  0.229326 
 
 
-
 
NC_009656  PSPA7_4033  hypothetical protein  46.46 
 
 
249 aa  214  8e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  0.179526  n/a   
 
 
-
 
NC_007948  Bpro_0083  protein of unknown function DUF899, thioredoxin-like  44.49 
 
 
265 aa  211  7.999999999999999e-54  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2423  protein of unknown function DUF899 thioredoxin family protein  48.18 
 
 
240 aa  210  1e-53  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2074  protein of unknown function DUF899 thioredoxin family protein  46.85 
 
 
258 aa  211  1e-53  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3150  protein of unknown function DUF899, thioredoxin family protein  44.88 
 
 
228 aa  208  7e-53  Paracoccus denitrificans PD1222  Bacteria  normal  0.3957  normal 
 
 
-
 
NC_002947  PP_2851  hypothetical protein  47.01 
 
 
242 aa  205  6e-52  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6317  protein of unknown function DUF899 thioredoxin family protein  43.24 
 
 
265 aa  203  2e-51  Variovorax paradoxus S110  Bacteria  normal  0.645433  n/a   
 
 
-
 
NC_007492  Pfl01_1441  hypothetical protein  43.03 
 
 
244 aa  196  2.0000000000000003e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2838  protein of unknown function DUF899, thioredoxin family protein  47.41 
 
 
242 aa  194  1e-48  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2930  protein of unknown function DUF899 thioredoxin family protein  46.61 
 
 
242 aa  194  1e-48  Pseudomonas putida GB-1  Bacteria  normal  0.0915809  normal 
 
 
-
 
NC_013132  Cpin_5073  protein of unknown function DUF899 thioredoxin family protein  41.18 
 
 
257 aa  192  3e-48  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.309281 
 
 
-
 
NC_009511  Swit_4847  protein of unknown function DUF899, thioredoxin family protein  44.66 
 
 
232 aa  189  4e-47  Sphingomonas wittichii RW1  Bacteria  normal  0.890001  normal 
 
 
-
 
NC_009719  Plav_1073  protein of unknown function DUF899 thioredoxin family protein  43.31 
 
 
241 aa  186  4e-46  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1335  protein of unknown function DUF899, thioredoxin family protein  41.25 
 
 
260 aa  177  2e-43  Pseudomonas mendocina ymp  Bacteria  normal  0.146435  normal 
 
 
-
 
NC_013739  Cwoe_4051  protein of unknown function DUF899 thioredoxin family protein  41.7 
 
 
238 aa  166  4e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.541879  normal 
 
 
-
 
NC_013595  Sros_0313  protein of unknown function DUF899, thioredoxin family protein  38.78 
 
 
234 aa  165  5e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.316291  normal 
 
 
-
 
NC_010571  Oter_1120  protein of unknown function DUF899 thioredoxin family protein  42.8 
 
 
255 aa  165  6.9999999999999995e-40  Opitutus terrae PB90-1  Bacteria  normal  0.845811  normal 
 
 
-
 
NC_009719  Plav_0967  protein of unknown function DUF899 thioredoxin family protein  39.57 
 
 
266 aa  163  2.0000000000000002e-39  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4093  protein of unknown function DUF899 thioredoxin family protein  41.44 
 
 
257 aa  159  6e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4114  protein of unknown function DUF899 thioredoxin family protein  35.16 
 
 
232 aa  145  6e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3921  protein of unknown function DUF899, thioredoxin family protein  35.9 
 
 
223 aa  145  7.0000000000000006e-34  Mycobacterium sp. JLS  Bacteria  normal  0.0512344  normal  0.178262 
 
 
-
 
NC_008146  Mmcs_3906  protein of unknown function DUF899, thioredoxin-like protein  35.47 
 
 
223 aa  143  3e-33  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3980  protein of unknown function DUF899, thioredoxin family protein  35.47 
 
 
223 aa  143  3e-33  Mycobacterium sp. KMS  Bacteria  normal  0.590341  normal 
 
 
-
 
NC_008726  Mvan_4382  protein of unknown function DUF899, thioredoxin family protein  35.04 
 
 
224 aa  140  1.9999999999999998e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2284  protein of unknown function DUF899, thioredoxin family protein  34.24 
 
 
224 aa  139  3.9999999999999997e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.41995 
 
 
-
 
NC_009380  Strop_2736  protein of unknown function DUF899, thioredoxin family protein  33.07 
 
 
222 aa  129  3e-29  Salinispora tropica CNB-440  Bacteria  normal  0.0311425  normal  0.559549 
 
 
-
 
NC_013739  Cwoe_0865  protein of unknown function DUF899 thioredoxin family protein  41.72 
 
 
223 aa  108  1e-22  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0692  protein of unknown function DUF899, thioredoxin family protein  30 
 
 
241 aa  106  3e-22  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0179397 
 
 
-
 
NC_009636  Smed_1280  protein of unknown function DUF899 thioredoxin family protein  42.25 
 
 
253 aa  103  4e-21  Sinorhizobium medicae WSM419  Bacteria  normal  0.127918  normal  0.405689 
 
 
-
 
NC_012850  Rleg_2487  protein of unknown function DUF899 thioredoxin family protein  40.14 
 
 
262 aa  101  1e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_7225  protein of unknown function DUF899 thioredoxin family protein  40.97 
 
 
261 aa  100  2e-20  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6078  protein of unknown function DUF899 thioredoxin family protein  32.31 
 
 
265 aa  99.8  4e-20  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1142  protein of unknown function DUF899, thioredoxin-like protein  38.26 
 
 
231 aa  98.2  1e-19  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1159  protein of unknown function DUF899, thioredoxin family protein  38.26 
 
 
231 aa  98.2  1e-19  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2194  protein of unknown function DUF899 thioredoxin family protein  37.09 
 
 
261 aa  97.4  2e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.167209  normal  0.0853422 
 
 
-
 
NC_009077  Mjls_1169  protein of unknown function DUF899, thioredoxin family protein  37.58 
 
 
231 aa  97.1  3e-19  Mycobacterium sp. JLS  Bacteria  normal  0.768824  normal  0.199001 
 
 
-
 
NC_009953  Sare_2183  protein of unknown function DUF899 thioredoxin family protein  30.35 
 
 
230 aa  92.8  4e-18  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0511946 
 
 
-
 
NC_009636  Smed_1983  protein of unknown function DUF899 thioredoxin family protein  36.23 
 
 
235 aa  91.7  9e-18  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1333  protein of unknown function DUF899, thioredoxin-like  37.93 
 
 
266 aa  91.7  1e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.726839  normal 
 
 
-
 
NC_012858  Rleg_6928  protein of unknown function DUF899 thioredoxin family protein  35.51 
 
 
233 aa  89  6e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.135694  normal 
 
 
-
 
NC_011366  Rleg2_5933  protein of unknown function DUF899 thioredoxin family protein  35.51 
 
 
233 aa  88.6  1e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.10378  normal  0.102215 
 
 
-
 
NC_007348  Reut_B4359  hypothetical protein  34.78 
 
 
232 aa  87  2e-16  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4678  protein of unknown function DUF899 thioredoxin family protein  33.8 
 
 
243 aa  83.2  0.000000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0953  hypothetical protein  33.1 
 
 
242 aa  82.8  0.000000000000005  Burkholderia xenovorans LB400  Bacteria  normal  0.920256  normal 
 
 
-
 
NC_006349  BMAA0828  hypothetical protein  34.25 
 
 
236 aa  81.6  0.00000000000001  Burkholderia mallei ATCC 23344  Bacteria  hitchhiker  0.0000230425  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2205  hypothetical protein  35.51 
 
 
236 aa  81.3  0.00000000000001  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.000000000209346  n/a   
 
 
-
 
NC_007650  BTH_II1767  hypothetical protein  36.09 
 
 
236 aa  81.3  0.00000000000001  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.000442261  n/a   
 
 
-
 
NC_007778  RPB_3245  hypothetical protein  34.59 
 
 
231 aa  81.6  0.00000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_0045  hypothetical protein  34.25 
 
 
236 aa  81.6  0.00000000000001  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.0000000000431681  n/a   
 
 
-
 
NC_009075  BURPS668_A0952  hypothetical protein  35.51 
 
 
236 aa  81.3  0.00000000000001  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.00000000155269  n/a   
 
 
-
 
NC_009079  BMA10247_A1575  hypothetical protein  34.25 
 
 
236 aa  81.6  0.00000000000001  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.0000230171  n/a   
 
 
-
 
NC_008146  Mmcs_0337  protein of unknown function DUF899, thioredoxin-like protein  34.9 
 
 
229 aa  79.7  0.00000000000004  Mycobacterium sp. MCS  Bacteria  normal  0.0510576  n/a   
 
 
-
 
NC_008705  Mkms_0347  protein of unknown function DUF899, thioredoxin family protein  34.9 
 
 
229 aa  79.7  0.00000000000004  Mycobacterium sp. KMS  Bacteria  normal  normal  0.33372 
 
 
-
 
NC_009077  Mjls_0326  protein of unknown function DUF899, thioredoxin family protein  34.9 
 
 
229 aa  78.6  0.00000000000008  Mycobacterium sp. JLS  Bacteria  normal  normal  0.497022 
 
 
-
 
NC_009078  BURPS1106A_A0859  hypothetical protein  34.78 
 
 
236 aa  77.4  0.0000000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0194115  n/a   
 
 
-
 
NC_010623  Bphy_5454  protein of unknown function DUF899 thioredoxin family protein  25.76 
 
 
236 aa  77  0.0000000000003  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0299136 
 
 
-
 
NC_012669  Bcav_0282  protein of unknown function DUF899 thioredoxin family protein  32.35 
 
 
233 aa  77  0.0000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0258482 
 
 
-
 
NC_007958  RPD_2218  protein of unknown function DUF899, thioredoxin-like  31.39 
 
 
231 aa  75.9  0.0000000000007  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.797158  normal  0.442221 
 
 
-
 
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