More than 300 homologs were found in PanDaTox collection
for query gene Ping_2010 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008709  Ping_2010  ABC transporter substrate binding inner membrane protein  100 
 
 
318 aa  639    Psychromonas ingrahamii 37  Bacteria  normal  0.360583  normal 
 
 
-
 
NC_009654  Mmwyl1_2009  binding-protein-dependent transport systems inner membrane component  74.74 
 
 
291 aa  444  1.0000000000000001e-124  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5738  ABC transporter membrane spanning protein (sugar)  62.85 
 
 
302 aa  378  1e-104  Agrobacterium vitis S4  Bacteria  normal  0.0678785  n/a   
 
 
-
 
NC_010622  Bphy_2350  binding-protein-dependent transport systems inner membrane component  62.93 
 
 
317 aa  374  1e-102  Burkholderia phymatum STM815  Bacteria  normal  normal  0.143445 
 
 
-
 
NC_009952  Dshi_1247  binding-protein-dependent transport systems inner membrane component  64.24 
 
 
308 aa  370  1e-101  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.732084 
 
 
-
 
NC_008061  Bcen_5200  binding-protein-dependent transport systems inner membrane component  57.89 
 
 
313 aa  365  1e-100  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5659  binding-protein-dependent transport systems inner membrane component  58.22 
 
 
313 aa  367  1e-100  Burkholderia cenocepacia HI2424  Bacteria  normal  0.308138  normal  0.32687 
 
 
-
 
NC_010515  Bcenmc03_4576  binding-protein-dependent transport systems inner membrane component  58.22 
 
 
314 aa  363  3e-99  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.00748515 
 
 
-
 
NC_010676  Bphyt_4587  binding-protein-dependent transport systems inner membrane component  61.99 
 
 
325 aa  362  4e-99  Burkholderia phytofirmans PsJN  Bacteria  normal  0.351015  normal 
 
 
-
 
NC_008391  Bamb_4933  binding-protein-dependent transport systems inner membrane component  58.9 
 
 
314 aa  358  6e-98  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.103484 
 
 
-
 
NC_010552  BamMC406_5488  binding-protein-dependent transport systems inner membrane component  58.78 
 
 
319 aa  358  6e-98  Burkholderia ambifaria MC40-6  Bacteria  normal  0.80176  hitchhiker  0.000205378 
 
 
-
 
NC_010086  Bmul_3195  binding-protein-dependent transport systems inner membrane component  61.01 
 
 
312 aa  354  1e-96  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.142654 
 
 
-
 
NC_008043  TM1040_3484  binding-protein-dependent transport systems inner membrane component  66.18 
 
 
275 aa  348  8e-95  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A1183  ABC transporter, permease protein  57.29 
 
 
307 aa  345  8.999999999999999e-94  Burkholderia pseudomallei 1710b  Bacteria  normal  0.101432  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2817  putative carbohydrate ABC transporter, permease protein  57.29 
 
 
307 aa  345  8.999999999999999e-94  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_2326  binding-protein-dependent transport systems inner membrane component  55.24 
 
 
294 aa  340  2.9999999999999998e-92  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.180469  normal 
 
 
-
 
NC_007802  Jann_3837  binding-protein-dependent transport systems inner membrane component  53.74 
 
 
350 aa  335  5.999999999999999e-91  Jannaschia sp. CCS1  Bacteria  normal  0.344745  normal 
 
 
-
 
NC_012850  Rleg_2651  binding-protein-dependent transport systems inner membrane component  54.2 
 
 
294 aa  332  7.000000000000001e-90  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.493427  normal 
 
 
-
 
NC_010557  BamMC406_6025  binding-protein-dependent transport systems inner membrane component  53.44 
 
 
305 aa  317  1e-85  Burkholderia ambifaria MC40-6  Bacteria  normal  0.584937  normal 
 
 
-
 
NC_008392  Bamb_6325  binding-protein-dependent transport systems inner membrane component  56.79 
 
 
305 aa  317  2e-85  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4879  binding-protein-dependent transport systems inner membrane component  56.45 
 
 
305 aa  313  2.9999999999999996e-84  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.825826  n/a   
 
 
-
 
NC_008543  Bcen2424_3286  binding-protein-dependent transport systems inner membrane component  56.45 
 
 
305 aa  313  2.9999999999999996e-84  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  41.92 
 
 
290 aa  230  2e-59  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  42.55 
 
 
294 aa  225  7e-58  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_014212  Mesil_2392  binding-protein-dependent transport systems inner membrane component  37.97 
 
 
318 aa  207  2e-52  Meiothermus silvanus DSM 9946  Bacteria  normal  0.488692  normal 
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
299 aa  193  3e-48  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
299 aa  189  4e-47  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_012669  Bcav_0941  binding-protein-dependent transport systems inner membrane component  35.33 
 
 
313 aa  184  2.0000000000000003e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.737632 
 
 
-
 
NC_012034  Athe_0615  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
296 aa  177  2e-43  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  33.23 
 
 
319 aa  176  5e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
312 aa  173  3.9999999999999995e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
309 aa  170  3e-41  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014158  Tpau_1000  binding-protein-dependent transport systems inner membrane component  33.23 
 
 
306 aa  169  4e-41  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0937011  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
306 aa  169  7e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2695  binding-protein-dependent transport systems inner membrane component  38.2 
 
 
309 aa  168  9e-41  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.179346  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
306 aa  167  2e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
309 aa  166  6.9999999999999995e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
297 aa  166  6.9999999999999995e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_1026  binding-protein-dependent transport systems inner membrane component  29.83 
 
 
300 aa  165  1.0000000000000001e-39  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0038089  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
317 aa  164  2.0000000000000002e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3986  putative ABC transporter (permease protein)  35.1 
 
 
313 aa  164  2.0000000000000002e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  33.13 
 
 
320 aa  164  2.0000000000000002e-39  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  32.78 
 
 
307 aa  162  5.0000000000000005e-39  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  32.78 
 
 
307 aa  162  5.0000000000000005e-39  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  32.38 
 
 
310 aa  163  5.0000000000000005e-39  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  32.38 
 
 
310 aa  162  6e-39  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
318 aa  162  6e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  33.11 
 
 
310 aa  161  1e-38  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1219  binding-protein-dependent transport systems inner membrane component  31.64 
 
 
297 aa  160  2e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  33.01 
 
 
310 aa  160  3e-38  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  30.23 
 
 
316 aa  160  3e-38  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  32.25 
 
 
310 aa  159  5e-38  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  32.25 
 
 
310 aa  159  5e-38  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  31.97 
 
 
319 aa  159  5e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  32.19 
 
 
318 aa  159  5e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  32.65 
 
 
310 aa  159  6e-38  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  32.65 
 
 
310 aa  159  6e-38  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_012850  Rleg_1307  binding-protein-dependent transport systems inner membrane component  31.64 
 
 
297 aa  159  6e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  30.58 
 
 
299 aa  159  7e-38  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
309 aa  158  1e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_2984  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
305 aa  158  1e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  32.46 
 
 
310 aa  158  1e-37  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  32.65 
 
 
310 aa  157  2e-37  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
296 aa  156  4e-37  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  33.21 
 
 
305 aa  156  4e-37  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_1134  binding-protein-dependent transport systems inner membrane component  31.43 
 
 
300 aa  156  5.0000000000000005e-37  Clostridium cellulolyticum H10  Bacteria  normal  0.454536  n/a   
 
 
-
 
NC_007802  Jann_2587  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
314 aa  155  1e-36  Jannaschia sp. CCS1  Bacteria  decreased coverage  0.000137508  normal 
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  33.57 
 
 
310 aa  155  1e-36  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4882  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
313 aa  154  2e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.115668  normal 
 
 
-
 
NC_012669  Bcav_0647  binding-protein-dependent transport systems inner membrane component  30.46 
 
 
325 aa  153  2.9999999999999998e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  31.86 
 
 
316 aa  153  4e-36  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_0943  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
312 aa  152  8e-36  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.301949 
 
 
-
 
NC_010003  Pmob_0288  binding-protein-dependent transport systems inner membrane component  30.28 
 
 
290 aa  152  8e-36  Petrotoga mobilis SJ95  Bacteria  hitchhiker  0.00066862  n/a   
 
 
-
 
NC_009767  Rcas_1880  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
316 aa  152  8e-36  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.2607 
 
 
-
 
NC_011369  Rleg2_1686  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
312 aa  152  8.999999999999999e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.746865  normal 
 
 
-
 
NC_009667  Oant_2484  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
318 aa  151  1e-35  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.575298  n/a   
 
 
-
 
NC_012669  Bcav_1529  binding-protein-dependent transport systems inner membrane component  32.56 
 
 
318 aa  151  2e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.165529  normal  0.149292 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  29.57 
 
 
300 aa  151  2e-35  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
292 aa  151  2e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  30.91 
 
 
288 aa  150  3e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_012850  Rleg_1867  binding-protein-dependent transport systems inner membrane component  30.07 
 
 
312 aa  150  3e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_07470  carbohydrate ABC transporter membrane protein  34.32 
 
 
304 aa  149  4e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6970  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
305 aa  149  5e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0388505  normal 
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  32.16 
 
 
310 aa  149  8e-35  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_009654  Mmwyl1_2763  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
315 aa  149  8e-35  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  31.54 
 
 
318 aa  147  2.0000000000000003e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  31.77 
 
 
308 aa  147  2.0000000000000003e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  30.28 
 
 
318 aa  147  2.0000000000000003e-34  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013526  Tter_2024  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
303 aa  147  3e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000249122  n/a   
 
 
-
 
NC_008578  Acel_1361  binding-protein-dependent transport systems inner membrane component  30.51 
 
 
315 aa  147  3e-34  Acidothermus cellulolyticus 11B  Bacteria  normal  0.193472  normal  0.165724 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  29.83 
 
 
295 aa  147  3e-34  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  31.1 
 
 
310 aa  147  3e-34  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_013595  Sros_4987  binding-protein-dependent transport systems inner membrane component  32.3 
 
 
292 aa  147  3e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal 
 
 
-
 
NC_013131  Caci_2784  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
306 aa  146  4.0000000000000006e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.390449  normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
316 aa  146  4.0000000000000006e-34  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  30.29 
 
 
317 aa  146  5e-34  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  30.67 
 
 
317 aa  146  6e-34  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_012669  Bcav_1656  binding-protein-dependent transport systems inner membrane component  28.89 
 
 
318 aa  146  6e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.152531  normal  0.26367 
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  31.88 
 
 
311 aa  145  9e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_014158  Tpau_3529  binding-protein-dependent transport systems inner membrane component  28.08 
 
 
311 aa  145  1e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
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