| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3484 |
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| Symbol | |
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| ID | 4075124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 515908 |
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| End bp | 516735 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638004999 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_611718 |
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| Protein GI | 99078460 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGTTCT TCCTGTTCTA CGTGATCTTT CCGATCCTGC AGAGCTTCAA CCTGTCGTTT
TACCGTTGGG ACGGCTTGGG CGAGCCGGTC TATGTCGGTG TAGAGAACTA CGTCGAGCTG
ATGGACGACC GCGCCTTTGA GGTCTCCATG TGGAACAACC TCAAATGGCT GCTGCTCTAC
TTGCTTGCGA TCCCTGCAGG GTTGGCGATC GCATTGTTTC TCAACCAGAA CATTGTCGGC
ATCCGGCTCT ATAAGTCTCT GTTTTTCTTC CCCTTTGTGA TCAGTCAGGT GGTTGTCGGA
CTGGTGTTCA GCTGGTTCTA TGACCCCACG TTTGGGCTCT TGAACCAGAT CCTTGGCTTT
TTTGGCTTTG GCACGCTCAA CGTTCTGGGC GATCCGAGTC TTGTCACATA CGGGATCATT
TTTGCCGGGC TCTGGCCGCA GACGGCCTAT TGCATGATCC TCTATCTCAC CGGTCTCAAT
GCCGTGGATC CAGAACAAGT GGAAGCTGCG CGGCTTGATG GGGCCAAGGG GCTCAAGATG
CTGTGGTATG TCATCATCCC GCAGCTGCGT CCTGCGACTT TTATTGCCTT TGTGGTCACA
ATCATCGGTG CGCTCCGGTC CTTTGATCTG ATCTCGATCA TGACCAACGG TGGTCCCTTT
GGGTCGTCGC GGGTGCTGTC GTTTTACATG TTTGAAAAAG CGCTCTCGGA ATATGGGTTT
CGTATGGGCT ATGGCGCCGC CATTGCCGTG GTCCTGTTCC TCATCATGCT GTCCTTCATC
GCCTACTTCC TGTGGTCGAT GTACCAAGAA GAGAAGGGGG GCCGCTGA
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| Protein sequence | MLFFLFYVIF PILQSFNLSF YRWDGLGEPV YVGVENYVEL MDDRAFEVSM WNNLKWLLLY
LLAIPAGLAI ALFLNQNIVG IRLYKSLFFF PFVISQVVVG LVFSWFYDPT FGLLNQILGF
FGFGTLNVLG DPSLVTYGII FAGLWPQTAY CMILYLTGLN AVDPEQVEAA RLDGAKGLKM
LWYVIIPQLR PATFIAFVVT IIGALRSFDL ISIMTNGGPF GSSRVLSFYM FEKALSEYGF
RMGYGAAIAV VLFLIMLSFI AYFLWSMYQE EKGGR
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