72 homologs were found in PanDaTox collection
for query gene PHATR_18516 on replicon NC_011671
Organism: Phaeodactylum tricornutum CCAP 1055/1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011671  PHATR_18516  succinate dehydrogenase cytochrome b subunit  100 
 
 		 167 aa  340  4e-93  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0149208  n/a   
 
 
-
 
NC_009360  OSTLU_10487  predicted protein  39.05 
 
 		 105 aa  72.8  0.000000000002  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.175572  normal  0.319372 
 
 
-
 
NC_009043  PICST_35527  succinate dehydrogenase  29.75 
 
 		 160 aa  67  0.0000000001  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.243811  normal  1 
 
 
-
 
NC_008789  Hhal_0046  succinate dehydrogenase, cytochrome b subunit  30.89 
 
 		 129 aa  58.9  0.00000003  Halorhodospira halophila SL1  Bacteria  normal  0.200427  n/a   
 
 
-
 
NC_011989  Avi_4137  succinate dehydrogenase cytochrome B-556 subunit  34.29 
 
 		 130 aa  55.5  0.0000004  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA1548  succinate dehydrogenase, cytochrome b556 subunit, putative  33.01 
 
 		 138 aa  53.9  0.000001  Methylococcus capsulatus str. Bath  Bacteria  normal  0.868422  n/a   
 
 
-
 
NC_008687  Pden_3021  succinate dehydrogenase, cytochrome b subunit  35.16 
 
 		 125 aa  53.5  0.000001  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.932135 
 
 
-
 
BN001303  ANIA_08793  Cytochrome B-560 subunit of succinate dehydrogenasePutative uncharacterized protein ; [Source:UniProtKB/TrEMBL;Acc:Q5ASD7]  40.43 
 
 		 191 aa  53.5  0.000001  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.0953988 
 
 
-
 
NC_007406  Nwi_2798  succinate dehydrogenase, cytochrome b subunit  36.26 
 
 		 141 aa  53.9  0.000001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008686  Pden_0567  succinate dehydrogenase, cytochrome b subunit  32.54 
 
 		 130 aa  52.8  0.000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.592184  normal  0.0786377 
 
 
-
 
NC_009484  Acry_1879  succinate dehydrogenase, cytochrome b subunit  39.56 
 
 		 143 aa  53.1  0.000002  Acidiphilium cryptum JF-5  Bacteria  normal  0.554321  n/a   
 
 
-
 
NC_008254  Meso_3246  succinate dehydrogenase subunit C  35.42 
 
 		 134 aa  53.1  0.000002  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_2959  succinate dehydrogenase cytochrome b556 subunit  34.44 
 
 		 130 aa  52.8  0.000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.0396146  normal  1 
 
 
-
 
NC_009667  Oant_0951  succinate dehydrogenase cytochrome b556 subunit  38.71 
 
 		 132 aa  52.8  0.000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.91234  n/a   
 
 
-
 
NC_010511  M446_6038  succinate dehydrogenase, cytochrome b556 subunit  33.9 
 
 		 133 aa  52  0.000003  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0678153 
 
 
-
 
NC_009505  BOV_1832  succinate dehydrogenase, cytochrome B subunit  34.07 
 
 		 187 aa  51.6  0.000005  Brucella ovis ATCC 25840  Bacteria  normal  0.725413  n/a   
 
 
-
 
NC_004310  BR1904  succinate dehydrogenase, cytochrome b556 subunit  33 
 
 		 132 aa  51.6  0.000005  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_006670  CNA03530  succinate dehydrogenase (ubiquinone), putative  30.32 
 
 		 221 aa  51.2  0.000006  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.462148  n/a   
 
 
-
 
NC_007958  RPD_0481  succinate dehydrogenase, cytochrome b subunit  35.16 
 
 		 129 aa  50.8  0.000008  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.376521  normal  0.74591 
 
 
-
 
NC_007925  RPC_0072  succinate dehydrogenase, cytochrome b subunit  31.63 
 
 		 132 aa  50.8  0.000009  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_3616  succinate dehydrogenase, cytochrome b subunit  35.16 
 
 		 132 aa  50.1  0.00001  Nitrobacter hamburgensis X14  Bacteria  normal  0.0175322  n/a   
 
 
-
 
NC_002978  WD1221  succinate dehydrogenase, cytochrome b556 subunit  33.68 
 
 		 125 aa  50.4  0.00001  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_1332  succinate dehydrogenase subunit C  33.68 
 
 		 130 aa  50.4  0.00001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.956048 
 
 
-
 
NC_010725  Mpop_4276  succinate dehydrogenase, cytochrome b556 subunit  34.31 
 
 		 133 aa  49.3  0.00002  Methylobacterium populi BJ001  Bacteria  normal  0.655158  normal  0.991601 
 
 
-
 
NC_008347  Mmar10_2848  succinate dehydrogenase, cytochrome b subunit  31.58 
 
 		 130 aa  50.1  0.00002  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_0086  succinate dehydrogenase, cytochrome b subunit  33.67 
 
 		 127 aa  49.3  0.00002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.745035  normal  1 
 
 
-
 
NC_011894  Mnod_7246  succinate dehydrogenase, cytochrome b556 subunit  33.05 
 
 		 133 aa  49.7  0.00002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.786807  n/a   
 
 
-
 
NC_011071  Smal_1535  succinate dehydrogenase, cytochrome b556 subunit  35.48 
 
 		 130 aa  48.9  0.00003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_2632  succinate dehydrogenase, cytochrome b556 subunit  28.06 
 
 		 131 aa  49.3  0.00003  Shewanella baltica OS195  Bacteria  hitchhiker  0.000174207  normal  0.11492 
 
 
-
 
NC_009952  Dshi_2867  putative succinate dehydrogenase cytochrome b subunit  34 
 
 		 127 aa  48.5  0.00004  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_2273  succinate dehydrogenase, cytochrome b subunit  28.06 
 
 		 131 aa  48.5  0.00004  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.0000969939  n/a   
 
 
-
 
NC_008577  Shewana3_1706  succinate dehydrogenase subunit C  29.77 
 
 		 131 aa  48.9  0.00004  Shewanella sp. ANA-3  Bacteria  normal  0.0121906  normal  0.572732 
 
 
-
 
NC_008322  Shewmr7_1706  succinate dehydrogenase subunit C  29.77 
 
 		 131 aa  48.9  0.00004  Shewanella sp. MR-7  Bacteria  decreased coverage  0.000208807  normal  1 
 
 
-
 
NC_008321  Shewmr4_1631  succinate dehydrogenase subunit C  29.77 
 
 		 131 aa  48.9  0.00004  Shewanella sp. MR-4  Bacteria  decreased coverage  0.0000702193  normal  1 
 
 
-
 
NC_009049  Rsph17029_2634  succinate dehydrogenase, cytochrome b subunit  33.67 
 
 		 127 aa  48.5  0.00005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_0974  succinate dehydrogenase subunit C  33.67 
 
 		 127 aa  48.5  0.00005  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010581  Bind_2751  succinate dehydrogenase, cytochrome b556 subunit  32.99 
 
 		 137 aa  48.1  0.00005  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_2512  succinate dehydrogenase cytochrome b556 subunit  29.77 
 
 		 131 aa  47.8  0.00007  Shewanella baltica OS185  Bacteria  decreased coverage  0.00000726446  n/a   
 
 
-
 
NC_009052  Sbal_2519  succinate dehydrogenase, cytochrome b subunit  29.77 
 
 		 131 aa  47.8  0.00008  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000447575  n/a   
 
 
-
 
NC_004347  SO_1927  succinate dehydrogenase, cytochrome b556 subunit  29.01 
 
 		 131 aa  47.8  0.00008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_1832  succinate dehydrogenase, cytochrome b556 subunit  29.77 
 
 		 131 aa  47.8  0.00008  Shewanella baltica OS223  Bacteria  hitchhiker  0.000145214  normal  0.191476 
 
 
-
 
NC_010172  Mext_3600  succinate dehydrogenase, cytochrome b556 subunit  34.62 
 
 		 133 aa  47.4  0.00009  Methylobacterium extorquens PA1  Bacteria  normal  0.0757766  normal  1 
 
 
-
 
NC_011757  Mchl_3892  succinate dehydrogenase, cytochrome b556 subunit  34.62 
 
 		 133 aa  47.4  0.00009  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.20895  normal  1 
 
 
-
 
NC_011004  Rpal_0218  succinate dehydrogenase, cytochrome b556 subunit  32.32 
 
 		 132 aa  47.4  0.00009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.287622  n/a   
 
 
-
 
NC_009783  VIBHAR_01351  succinate dehydrogenase cytochrome b556 large membrane subunit  31.25 
 
 		 130 aa  47  0.0001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_012850  Rleg_3980  succinate dehydrogenase, cytochrome b556 subunit  36.84 
 
 		 131 aa  47  0.0001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.350999 
 
 
-
 
NC_011369  Rleg2_3692  succinate dehydrogenase, cytochrome b556 subunit  36.84 
 
 		 131 aa  47  0.0001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_0811  succinate dehydrogenase subunit C  32.97 
 
 		 127 aa  47.4  0.0001  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.609533 
 
 
-
 
NC_009719  Plav_1433  succinate dehydrogenase cytochrome b556 subunit  31.82 
 
 		 135 aa  46.2  0.0002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_3565  succinate dehydrogenase, cytochrome b556 subunit  32.32 
 
 		 131 aa  46.2  0.0002  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_008783  BARBAKC583_0088  succinate dehydrogenase, cytochrome b556 subunit  29.81 
 
 		 133 aa  46.2  0.0002  Bartonella bacilliformis KC583  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_1967  succinate dehydrogenase cytochrome b556 subunit  34.09 
 
 		 133 aa  45.4  0.0003  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.124029 
 
 
-
 
NC_013421  Pecwa_3104  succinate dehydrogenase cytochrome b556 large membrane subunit  36.08 
 
 		 129 aa  45.4  0.0003  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_2347  succinate dehydrogenase, cytochrome b subunit  26.06 
 
 		 131 aa  45.8  0.0003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.270921  n/a   
 
 
-
 
NC_012917  PC1_1232  succinate dehydrogenase cytochrome b556 large membrane subunit  36.08 
 
 		 129 aa  45.4  0.0004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_0327  succinate dehydrogenase, cytochrome b subunit  30.68 
 
 		 132 aa  45.1  0.0004  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A1202  succinate dehydrogenase subunit C  33.33 
 
 		 132 aa  45.4  0.0004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.824011  n/a   
 
 
-
 
NC_010505  Mrad2831_0457  succinate dehydrogenase, cytochrome b556 subunit  32.04 
 
 		 133 aa  44.7  0.0005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0478832  normal  1 
 
 
-
 
NC_009708  YpsIP31758_2885  succinate dehydrogenase cytochrome b556 large membrane subunit  34.17 
 
 		 125 aa  44.7  0.0005  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000160514  n/a   
 
 
-
 
NC_007954  Sden_2187  succinate dehydrogenase, cytochrome b subunit  26.76 
 
 		 131 aa  45.1  0.0005  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000726424  n/a   
 
 
-
 
NC_008228  Patl_1795  succinate dehydrogenase, cytochrome b subunit  32.69 
 
 		 124 aa  45.1  0.0005  Pseudoalteromonas atlantica T6c  Bacteria  decreased coverage  0.000000214378  n/a   
 
 
-
 
NC_010159  YpAngola_A1380  succinate dehydrogenase cytochrome b556 large membrane subunit  34.17 
 
 		 129 aa  44.7  0.0006  Yersinia pestis Angola  Bacteria  hitchhiker  0.00254189  normal  0.334733 
 
 
-
 
NC_010465  YPK_2972  succinate dehydrogenase cytochrome b556 large membrane subunit  34.17 
 
 		 129 aa  44.7  0.0006  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.040643  n/a   
 
 
-
 
NC_010506  Swoo_1833  succinate dehydrogenase, cytochrome b556 subunit  30.95 
 
 		 124 aa  43.5  0.001  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00848853  normal  0.0380637 
 
 
-
 
NC_011312  VSAL_I0842  succinate dehydrogenase cytochrome b556 large membrane subunit  29.1 
 
 		 133 aa  43.9  0.001  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A1677  succinate dehydrogenase cytochrome b556 large membrane subunit  33.68 
 
 		 130 aa  43.5  0.001  Vibrio cholerae O395  Bacteria  normal  0.129902  n/a   
 
 
-
 
NC_007912  Sde_2110  succinate dehydrogenase subunit C  51.28 
 
 		 124 aa  42.7  0.002  Saccharophagus degradans 2-40  Bacteria  decreased coverage  0.00000314056  normal  1 
 
 
-
 
NC_009832  Spro_1263  succinate dehydrogenase cytochrome b556 large membrane subunit  32.95 
 
 		 129 aa  42.7  0.002  Serratia proteamaculans 568  Bacteria  normal  0.285763  normal  0.273357 
 
 
-
 
NC_008700  Sama_1423  succinate dehydrogenase, cytochrome b556 subunit  28.15 
 
 		 131 aa  42.4  0.003  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000106154  normal  1 
 
 
-
 
NC_012880  Dd703_1140  succinate dehydrogenase, cytochrome b556 subunit  31.15 
 
 		 129 aa  42  0.004  Dickeya dadantii Ech703  Bacteria  normal  0.669517  n/a   
 
 
-
 
NC_007799  ECH_0918  succinate dehydrogenase, cytochrome b556 subunit  32.98 
 
 		 128 aa  41.6  0.005  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  0.798189  n/a   
 
 
-
 
NC_008043  TM1040_3525  succinate dehydrogenase subunit C  30.61 
 
 		 127 aa  40.8  0.009  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
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