Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_2885 |
Symbol | sdhC |
ID | 5385157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3256148 |
End bp | 3256525 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640865885 |
Product | succinate dehydrogenase cytochrome b556 large membrane subunit |
Protein accession | YP_001401848 |
Protein GI | 153948100 |
COG category | [C] Energy production and conversion |
COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0000160514 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAC AAAGACCTGT CAATTTGGAT CTGCAAACGA TTCGATTTCC TGTTACTGCG ATAGCGTCCA TCTTACACCG AGTCTCTGGC GTAATTACCT TCGTGGCTGT CGGTATCCTC CTCTGGCTGT TGGGTTTGTC TGTTTCCTCA CAAGAAGGAT TCATGCAGGC AGCAACCATC ATGAATAGTT TTTTTGTTAA ATTCATCTTT TGGGGAATAC TCACTGCGCT GGCTTATCAC ATTTGCGGTG GCATCCGTCA CTTGTTAATG GATTTTGGCT ATCTCGAAGA GAATTTAGCC GTGGGTACCC GTTCTGCTCA AGTGGCAATG GGATTAACCC TCGTGTTGTC AGTTTTGGCT GGAGTCCTCG TATGGTAA
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Protein sequence | MKKQRPVNLD LQTIRFPVTA IASILHRVSG VITFVAVGIL LWLLGLSVSS QEGFMQAATI MNSFFVKFIF WGILTALAYH ICGGIRHLLM DFGYLEENLA VGTRSAQVAM GLTLVLSVLA GVLVW
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