Gene YpsIP31758_2885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2885 
SymbolsdhC 
ID5385157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3256148 
End bp3256525 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content46% 
IMG OID640865885 
Productsuccinate dehydrogenase cytochrome b556 large membrane subunit 
Protein accessionYP_001401848 
Protein GI153948100 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0000160514 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAC AAAGACCTGT CAATTTGGAT CTGCAAACGA TTCGATTTCC TGTTACTGCG 
ATAGCGTCCA TCTTACACCG AGTCTCTGGC GTAATTACCT TCGTGGCTGT CGGTATCCTC
CTCTGGCTGT TGGGTTTGTC TGTTTCCTCA CAAGAAGGAT TCATGCAGGC AGCAACCATC
ATGAATAGTT TTTTTGTTAA ATTCATCTTT TGGGGAATAC TCACTGCGCT GGCTTATCAC
ATTTGCGGTG GCATCCGTCA CTTGTTAATG GATTTTGGCT ATCTCGAAGA GAATTTAGCC
GTGGGTACCC GTTCTGCTCA AGTGGCAATG GGATTAACCC TCGTGTTGTC AGTTTTGGCT
GGAGTCCTCG TATGGTAA
 
Protein sequence
MKKQRPVNLD LQTIRFPVTA IASILHRVSG VITFVAVGIL LWLLGLSVSS QEGFMQAATI 
MNSFFVKFIF WGILTALAYH ICGGIRHLLM DFGYLEENLA VGTRSAQVAM GLTLVLSVLA
GVLVW