| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_35527 |
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| Symbol | SDH6 |
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| ID | 4837680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 848982 |
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| End bp | 849464 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 12 |
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| GC content | 49% |
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| IMG OID | 640388995 |
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| Product | succinate dehydrogenase |
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| Protein accession | XP_001383794 |
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| Protein GI | 126134539 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
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| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.243811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGCCT CCAGACTCTC TGCTGCCAGA GTCTTGTTGG CCAGATCTGT CTCTACCGTG
AAGGCTTCGC ACGATCAAGA GAATGAAATC TTGATAGCCC AACGTAAAAA CAGACCCGTG
TCGCCTCACT TGACCATTTA CCAACCACAA TTGACAATGG TGTTGTCCAG TTTTCACAGA
ATCACCGGGG TGGCCATGGC TGGCGCCTTC TACGCCTTGA CCTGTGGATA CGCTGCCACT
TCTATCTTGA ACATTCCTTT CGATGCTTCT GTTTTGGTTG GCGTTTTCGC TTCTTTGCCT
GTCGCTGTCA AGTTATCAGC CAAGGCTCTT ATGGCTTACC CATTCGCTTT TCATTTCGGT
AACGGTATCA GACACTTGGT CTGGGATTTC GGTAAGGAAT TGTCCATTCC CGGTGTCTAC
AGAACTGGTT ACGCTGTATT AGCTGTTACT GCCGTCTTCG GCTCCTACTT GGCTTTCTTT
TAG
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| Protein sequence | MSASRLSAAR VLLARSVSTV KASHDQENEI LIAQRKNRPV SPHLTIYQPQ LTMVLSSFHR
ITGVAMAGAF YALTCGYAAT SILNIPFDAS VLVGVFASLP VAVKLSAKAL MAYPFAFHFG
NGIRHLVWDF GKELSIPGVY RTGYAVLAVT AVFGSYLAFF
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