Gene Nham_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3616 
Symbol 
ID4030386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3982985 
End bp3983383 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content63% 
IMG OID637972028 
Productsuccinate dehydrogenase, cytochrome b subunit 
Protein accessionYP_578804 
Protein GI92119075 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0175322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTCA GGATCGAACG TCCGCTTTCG CCGCACCTAC AGATTTACCG CTGGACCCTG 
ACGATGGCAT TGTCCGTCGT CCATCGCGCG ACCGGCATGG CGCTCTATTT CGGGACGCTG
CTGCTGGTCT GGTGGTTGAT TGCGGTGTCG TCCGGGCCGG GCGCCTATGC CGCGGTGCAG
TCGTTCACCG CGAGCTGGAT CGGCCGGCTG ATCGCATTCG GATATACGTG GGCGCTGATG
CATCACATGC TGAGCGGCGT TCGCCACCTC GTCTGGGACC TCGGTTACGG GTTCAAGCCG
GCCGAGCGTG AATGGCTCAC TCGGGCAGCG CTGATCGGCG GCATTTTGCT CACGGTGCTG
CTGTGGATCG TCGCCTATGC GGTCGGAGGC GGACGATGA
 
Protein sequence
MTVRIERPLS PHLQIYRWTL TMALSVVHRA TGMALYFGTL LLVWWLIAVS SGPGAYAAVQ 
SFTASWIGRL IAFGYTWALM HHMLSGVRHL VWDLGYGFKP AEREWLTRAA LIGGILLTVL
LWIVAYAVGG GR