Gene RPB_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0327 
Symbol 
ID3908708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp371913 
End bp372311 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content67% 
IMG OID637882213 
Productsuccinate dehydrogenase, cytochrome b subunit 
Protein accessionYP_483949 
Protein GI86747453 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA GGATCGACCG ACCGCTTTCG CCCCATATGC AGGCCTACCG CTGGAGCCTG 
ACGATGGCCC TGTCCATCGT CCACCGCGCC ACCGGCATTG CGCTGTATTT TGGAACCCTT
CTGCTGGCCT GGTGGCTGAT CGCCTGCGCG GCCGGCCCCG CCGCCTACGC CAACGTCCAG
GCCTTCACCG GCAGCTGGAT CGGCCGGCTG ATCCTGTTCG GCTACACCTG GGCGCTGATG
CACCATCTGC TCAGCGGCGT CCGGCATTTC GTCTGGGATC TCGGCTATGG CTTCAAGACC
GCCGACCGGG AATGGCTCAC CTGGGCCGCG CTGATCGGCG GCATCGTGCT GACCGTGCTG
CTCTGGGTGG TCGCCTTCAC GATGGGGGTC GCCCGATGA
 
Protein sequence
MTARIDRPLS PHMQAYRWSL TMALSIVHRA TGIALYFGTL LLAWWLIACA AGPAAYANVQ 
AFTGSWIGRL ILFGYTWALM HHLLSGVRHF VWDLGYGFKT ADREWLTWAA LIGGIVLTVL
LWVVAFTMGV AR