Gene PC1_1232 details

Gene Information

• Locus tag: PC1_1232
• Symbol: sdhC
• ID: 8132167
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1439098
• End bp: 1439487
• Gene Length: 390 bp
• Protein Length: 129 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 644864520
• Product: succinate dehydrogenase cytochrome b556 large membrane subunit
• Protein accession: YP_003016816
• Protein GI: 253687626
• COG category: [C] Energy production and conversion
• COG ID: [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
• TIGRFAM ID: [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGCAAAT CCGTGAAAAA ACAAAGACCT GTCAATCTGG AATTGCAGAC GATCCAGTTT 
CCCGTTACTG CGATAGCATC TATTCTTCAC CGCGTCTCCG GCGTTATCAC CTTTGTCGCT 
GTCGGTATTT TACTGTGGCT GTTAGGCACT TCTCTTTCTT CAGAGGAAGG ATTCCTGCGC 
GCTGCGGAAA TTATGGATAG CTTCATCGTC AAATTTATCG TTTGGGGCAT CCTCGTTGCG 
TTGGCTTATC ACATTGTTGG TGGTTTACGT CATCTCTTGA TGGATTTTGG CTATATAGAA 
GAAGACCTTG CCGCAGGTAA GCGTTCTGCA AATATCTCCT TTATTATTAC TGTCGTGCTT 
TCAATTCTGG CTGGAGTCCT CGTATGGTAA 

 

Protein sequence

MGKSVKKQRP VNLELQTIQF PVTAIASILH RVSGVITFVA VGILLWLLGT SLSSEEGFLR 
AAEIMDSFIV KFIVWGILVA LAYHIVGGLR HLLMDFGYIE EDLAAGKRSA NISFIITVVL 
SILAGVLVW