Gene VIBHAR_01351 details

Gene Information

• Locus tag: VIBHAR_01351
• Symbol: sdhC
• ID: 5556169
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 1361181
• End bp: 1361573
• Gene Length: 393 bp
• Protein Length: 130 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640906843
• Product: succinate dehydrogenase cytochrome b556 large membrane subunit
• Protein accession: YP_001444555
• Protein GI: 156973648
• COG category: [C] Energy production and conversion
• COG ID: [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
• TIGRFAM ID: [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCAAGC CCGTGAAAGA AAGAAAGTCA AGACCTGTTA ATTTAGATTT ACAGACCATC 
CGCTTTCCCA TCACAGCAAT CGCGTCCATC CTACACCGTG TGTCGGGTGT GATTACGTTT 
GTTGCGGTGG GTATATTACT TTGGTTACTG TCCATTTCTC TGTCATCCCC GATGGGTTTT 
ATGGAAGCCG CTGACATCGT CGATAGCTTC TTCGTGAAAT TCATTCTGTG GGGAATTCTA 
ACTGCACTTG CCTACCACAT TGCTGGTGGT GTTCGTCACT TGTTGATGGA CCTAGGCCAC 
TTTGAAGAAC TCGAGTCAGG CGCAATGAGC GCTAAAGTCG CGTTTGGTGC TACTGCAGTG 
TTATCACTAT TGGCGGGGAT CTTGTTATGG TAA 

 

Protein sequence

MSKPVKERKS RPVNLDLQTI RFPITAIASI LHRVSGVITF VAVGILLWLL SISLSSPMGF 
MEAADIVDSF FVKFILWGIL TALAYHIAGG VRHLLMDLGH FEELESGAMS AKVAFGATAV 
LSLLAGILLW