| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3104 |
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| Symbol | sdhC |
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| ID | 8531513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3384009 |
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| End bp | 3384398 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | succinate dehydrogenase cytochrome b556 large membrane subunit |
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| Protein accession | YP_003260453 |
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| Protein GI | 261822347 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGGCAAAT CCGTGAAAAA ACAAAGACCT GTCAATCTGG AATTGCAGAC GATTCAGTTC
CCCGTTACTG CGATAGCATC TATTCTTCAC CGCGTCTCCG GCGTTATCAC CTTTGTCGCT
GTCGGTATTT TACTGTGGCT GTTAGGCACT TCTCTTTCTT CAGAGGAAGG GTTCCTACGC
GCCGCGGAAA TTATGGATAG TTTCATCGTC AAGTTTATCG TCTGGGGCAT CCTCGCTGCG
TTGGCTTATC ACATTGTTGG TGGTTTACGT CACCTGTTGA TGGATTTTGG CTATATAGAA
GAAGACCTTG CCGCAGGTAA GCGTTCTGCA AATATTTCAT TTATTATTAC TGTCGTGCTT
TCAATTCTGG CTGGAGTCCT CGTATGGTAA
|
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| Protein sequence | MGKSVKKQRP VNLELQTIQF PVTAIASILH RVSGVITFVA VGILLWLLGT SLSSEEGFLR
AAEIMDSFIV KFIVWGILAA LAYHIVGGLR HLLMDFGYIE EDLAAGKRSA NISFIITVVL
SILAGVLVW
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