Gene CNA03530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA03530 
Symbol 
ID3253728 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand- 
Start bp915591 
End bp916677 
Gene Length1087 bp 
Protein Length221 aa 
Translation table 
GC content50% 
IMG OID638252683 
Productsuccinate dehydrogenase (ubiquinone), putative 
Protein accessionXP_566692 
Protein GI58258559 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.462148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGA TAATTGGCGC CGGGTATTGG ACGAATGGGA TTCGGTGGAT TATCTTCGAT 
TCTCTGCATC TTCGTCTGCC TCTCAACGTC AACTCATCTG TGCTTCTTTC CATCTTTGCC 
TACTCGCCCC CAATGTCCAC TTCCATCCTC CGCAACTCCC TCGCCAGGGC AGTCCACAAG 
CGTGCGTACA TCCACAGCGC CGCAAAACAC CGATGATCAA CTGACTTCTC CCAGCCTCAA 
TCCTCCGGAC AACTCCTGGT CTCATGCTCG CCCAGCGACG GTGTGTACCA ACAAGTTTAC 
TATAGAGGAG CAATGCGAAA GGTGCTGACC ATAAACAGAC TCGCCTCCAC CGAGTCCGTG 
ACTGCCGCTG AGAGCATTGC CCTTCTTAAC TCCCAAAGGC AGCACCGACC TACGTCTCCT 
CACTTGGCCA TCTACCAGCC TCAGGTTTGT ATAGACCTGC TCTGCCATAT CTTATTTCAC 
ATCGCTGACA TATGTCCATA GCTCACATGG TATCTCTCCA GTTTGCATCG TATCACCGGT 
GTCGCTTTTG GAGGTGCCCT TTACCTTTCC GCCATGGCCT ACCTACTTCA CCCCCTTGTC 
CCTGTCATCG ACTCTGCCCA CCTCATTCAA CTCGTGCACG ACTTGCCTGG ATGGTTCAAG 
GGAAGCGCCA AGTTCATCAT CGCCCTTCCC TTTACCTTTC ACTGCTACAA TGGTTTGAGG 
CATTTGAACT GGGACATCGG AAAAGGTGAG TTTTTTTCTT ACTCTCTTGG ATGAGACACC 
GAGAGCGGCA AAGTTTCGAT TGAGATGGTC ATGATGGCGT GAAAAATCGT TGAAATGTGA 
ACTAATGCAA TTTGTAGCTC TTACCATTAA GGGTGTCTAC CGAACAGGTT ACGCTGTCCT 
CGGTGCCACT GTCCTCTCTT CTCTCTACCT CGCTTTCTTC ATTTAATTTC GGTGTATATG 
GCTTGCGATC AGGATTAGGG TTGCAAGGTT GTTATTGGGG TGAAGGAGAT GGGTGTTTGA 
GAGACGGCAC GATTGCATTT TGCTGTGCCG CTGTATTTTT TACGATATGG ATGCAAGGGA 
TCAATTT
 
Protein sequence
MSLIIGAGYW TNGIRWIIFD SLHLRLPLNV NSSVLLSIFA YSPPMSTSIL RNSLARAVHK 
PSILRTTPGL MLAQRRLAST ESVTAAESIA LLNSQRQHRP TSPHLAIYQP QLTWYLSSLH 
RITGVAFGGA LYLSAMAYLL HPLVPVIDSA HLIQLVHDLP GWFKGSAKFI IALPFTFHCY 
NGLRHLNWDI GKALTIKGVY RTGYAVLGAT VLSSLYLAFF I