Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_4137 |
Symbol | sdhC |
ID | 7386914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3488590 |
End bp | 3488982 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643652832 |
Product | succinate dehydrogenase cytochrome B-556 subunit |
Protein accession | YP_002551005 |
Protein GI | 222150048 |
COG category | [C] Energy production and conversion |
COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAACG TGACAAAACA ACGGCCTTTG TCGCCGCATC TGCAAATCTA CAAGCTTGTT CCGACAATGT TGATGTCCAT CGTGCATCGC ATTACCGGCG GAGCCTTGTA TTTTGGGACC GCGCTGGTTG CTTGGTGGCT GATCGCCGCC TCGACGGGAG CGGATTATTA CGATTGGGTC TCCTGGTTCA TGGGGACGTT CATCGGCAAG ATCATTCTGT TCGGCTTCAG CTGGGCGCTG ATCCACCACA TGCTGGGTGG CATGCGCCAT TTCGCATGGG ACTTGGGCTA TGGTCTGGAG AAACACTTCA ACACCAAGCT CGCCAAGGCG ACAGCCGTTG CATCCGTCGT CCTGACCGTT CTGGTCTGGG TCGTCGCGTT CATCATCCGC TGA
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Protein sequence | MANVTKQRPL SPHLQIYKLV PTMLMSIVHR ITGGALYFGT ALVAWWLIAA STGADYYDWV SWFMGTFIGK IILFGFSWAL IHHMLGGMRH FAWDLGYGLE KHFNTKLAKA TAVASVVLTV LVWVVAFIIR
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