Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1706 |
Symbol | |
ID | 4255265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2013972 |
End bp | 2014367 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638122364 |
Product | succinate dehydrogenase subunit C |
Protein accession | YP_737756 |
Protein GI | 114047206 |
COG category | [C] Energy production and conversion |
COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000208807 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTGA GTGAGCAGAA CGTGAAAAAG CAAAGACCTG TCCATTTAGA TCTGCAGACC ATTCGCTTTC CTGCAACAGC GATTGTGTCA ATTCTTCACC GTGTATCCGG TGTCATCATG CTGTTCGCTG TTGGCATTCT TATTTGGTTG CTAAATTCAT CTTTAGCCTC CGCTGAAAGT TTCGCAGGCG TACAATCTCT GTTTGATAAC TTCGTCGTGA AGTTCATCAT GTGGGGCATT TTGACTGCAC TGGCCTATCA CTTATTCGGT GGTCTACGCC ACTTAGTAAT GGATACTGGC CGTTGGGAAG AGTTGGCTTC GGGCACCGCC TCAGCGAAAG CTGTATTTGT ACTGACGGTA GCCTTTTCAA TTTTAGCGGG GTTATGGGTA TGGTAA
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Protein sequence | MELSEQNVKK QRPVHLDLQT IRFPATAIVS ILHRVSGVIM LFAVGILIWL LNSSLASAES FAGVQSLFDN FVVKFIMWGI LTALAYHLFG GLRHLVMDTG RWEELASGTA SAKAVFVLTV AFSILAGLWV W
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