Gene Pden_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0567 
Symbol 
ID4579688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp541157 
End bp541549 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content65% 
IMG OID639767885 
Productsuccinate dehydrogenase, cytochrome b subunit 
Protein accessionYP_914375 
Protein GI119383319 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.592184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0786377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG TCAACCGGGG CAACCGGCCA CTGTCACCGC ATTTGCAGGT CTATCGCCTG 
CCACTTGCCG CAATCACTTC GATCATGACC CGTATCACCG GCCACGCCCT GGTCGCCGGG
ATCGTGCTGA TCACCTGGTG GCTGGTCGCT GCCGTGACCT CGCCCGGCGC CTTCGCCTGC
GCCGACTGGG TGGTGCGGTC CTGGCTGGGC TTCATCATCC TGACCGGCTC GATGTGGGCG
CTGTGGTATC ACCTGCTCGC CGGGCTGCGC CACCTGTTCT ACGACGCCGG CTACGGGCTG
GAGATCGAGC AGGCGCACAA GTCGAGCCAG GCGCTGATCG CGGGTTCGGT CGTGCTGGCC
GTGCTGACGC TGATCGTCTT TTTCGTGTTC TGA
 
Protein sequence
MADVNRGNRP LSPHLQVYRL PLAAITSIMT RITGHALVAG IVLITWWLVA AVTSPGAFAC 
ADWVVRSWLG FIILTGSMWA LWYHLLAGLR HLFYDAGYGL EIEQAHKSSQ ALIAGSVVLA
VLTLIVFFVF