Gene MCA1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1548 
Symbol 
ID3104981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand+ 
Start bp1650853 
End bp1651269 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content65% 
IMG OID637170721 
Productsuccinate dehydrogenase, cytochrome b556 subunit, putative 
Protein accessionYP_114003 
Protein GI53804146 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.868422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGAA TGAACACCGA GCCGCCCCGC CCGTCCGTCC GCGAACGTCC GCTTTCTCCT 
CACCTCCAGG TCTATCGCCT GCCGGTCACG GCCCTGCTGT CCATCAGCCA CCGGATCACC 
GGCGTCCTGC TTGGCATCGG CCTGATCGGG CTGGTGCTGG TGCTCATGTC AGTGGTCCAG 
GGGCCGTCGG CCTATGCACC GGTCCATGCC TTCCTGTCCG GCATCGCCGG CAGAAGCCTG 
CTTTGGATCT GGATCACCGC CCTGCTTTTC CACCTTTCCC ATGGCATTCG CCACCTCGTC 
TGGGACACCG GCCATGGTTT CTCGCGGGAT TCCCTCCTGT ATTACGCGCT GGGCGAATTT 
GCGGCGGCGC TGGTACTGGT CCTGGCCGTC GCCATCGCCA CCCTCGCCCG GAGCTGA
 
Protein sequence
MERMNTEPPR PSVRERPLSP HLQVYRLPVT ALLSISHRIT GVLLGIGLIG LVLVLMSVVQ 
GPSAYAPVHA FLSGIAGRSL LWIWITALLF HLSHGIRHLV WDTGHGFSRD SLLYYALGEF 
AAALVLVLAV AIATLARS