65 homologs were found in PanDaTox collection
for query gene Spea_1603 on replicon NC_009901
Organism: Shewanella pealeana ATCC 700345



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009901  Spea_1603  5-carboxymethyl-2-hydroxymuconate isomerase  100 
 
 		 114 aa  236  1e-61  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00936983  n/a   
 
 
-
 
NC_009092  Shew_1507  5-carboxymethyl-2-hydroxymuconate isomerase  52.63 
 
 		 115 aa  131  3e-30  Shewanella loihica PV-4  Bacteria  normal  0.0110902  normal  0.8408 
 
 
-
 
NC_009831  Ssed_1837  5-carboxymethyl-2-hydroxymuconate isomerase  52.21 
 
 		 117 aa  121  3e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  0.60746  normal  1 
 
 
-
 
NC_008700  Sama_2103  putative 5-carboxymethyl-2-hydroxymuconate D-isomerase  44.25 
 
 		 113 aa  97.4  5e-20  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.733883 
 
 
-
 
NC_009457  VC0395_A2242  putative 5-carboxymethyl-2-hydroxymuconate delta isomerase  33.91 
 
 		 116 aa  80.5  0.000000000000007  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_001759  5-carboxymethyl-2-hydroxymuconate delta-isomerase  32.17 
 
 		 115 aa  74.3  0.0000000000005  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_011312  VSAL_I0284  5-carboxymethyl-2-hydroxymuconate isomerase  33.93 
 
 		 116 aa  73.9  0.0000000000007  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_00710  hypothetical protein  34.78 
 
 		 115 aa  72.8  0.000000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_2149  5-carboxymethyl-2-hydroxymuconate isomerase  35.54 
 
 		 120 aa  71.2  0.000000000004  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.339839 
 
 
-
 
NC_009439  Pmen_1340  5-carboxymethyl-2-hydroxymuconate isomerase-like protein  34.21 
 
 		 117 aa  68.9  0.00000000002  Pseudomonas mendocina ymp  Bacteria  normal  0.271195  normal  1 
 
 
-
 
NC_010506  Swoo_0976  5-carboxymethyl-2-hydroxymuconate isomerase  34.78 
 
 		 111 aa  65.1  0.0000000003  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.872717 
 
 
-
 
NC_008228  Patl_2612  putative 5-carboxymethyl-2-hydroxymuconate delta isomerase  31.19 
 
 		 113 aa  62  0.000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_004311  BRA1162  5-carboxymethyl-2-hydroxymuconate delta isomerase  31.09 
 
 		 130 aa  58.2  0.00000004  Brucella suis 1330  Bacteria  normal  0.837994  n/a   
 
 
-
 
NC_009504  BOV_A1065  5-carboxymethyl-2-hydroxymuconate delta isomerase  31.09 
 
 		 130 aa  58.2  0.00000004  Brucella ovis ATCC 25840  Bacteria  normal  0.0224972  n/a   
 
 
-
 
NC_013093  Amir_3825  5-carboxymethyl-2-hydroxymuconate isomerase  30.43 
 
 		 121 aa  57.8  0.00000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0512515  n/a   
 
 
-
 
NC_011369  Rleg2_3466  putative 5-carboxymethyl-2-hydroxymuconate delta isomerase protein  37.93 
 
 		 122 aa  56.2  0.0000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007511  Bcep18194_B0126  5-carboxymethyl-2-hydroxymuconate isomerase  31.62 
 
 		 136 aa  55.8  0.0000002  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011368  Rleg2_4440  5-carboxymethyl-2-hydroxymuconate isomerase  41.03 
 
 		 128 aa  54.7  0.0000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.436322 
 
 
-
 
NC_009654  Mmwyl1_3173  5-carboxymethyl-2-hydroxymuconate isomerase  35.29 
 
 		 126 aa  52.8  0.000001  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00000163889  normal  1 
 
 
-
 
NC_007954  Sden_1896  hypothetical protein  28.44 
 
 		 161 aa  52.8  0.000002  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_1694  5-carboxymethyl-2-hydroxymuconate isomerase  36.11 
 
 		 155 aa  51.6  0.000004  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_5828  5-carboxymethyl-2-hydroxymuconate isomerase  35.48 
 
 		 133 aa  51.2  0.000005  Burkholderia phytofirmans PsJN  Bacteria  normal  0.374293  normal  0.270362 
 
 
-
 
NC_007952  Bxe_B2032  5-carboxymethyl-2-hydroxymuconate isomerase(HpcD)  37.21 
 
 		 137 aa  50.8  0.000006  Burkholderia xenovorans LB400  Bacteria  normal  0.488422  normal  0.194085 
 
 
-
 
NC_013411  GYMC61_3108  5-carboxymethyl-2-hydroxymuconate isomerase  30.33 
 
 		 128 aa  50.4  0.000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007511  Bcep18194_B1779  5-carboxymethyl-2-hydroxymuconate isomerase  33.33 
 
 		 130 aa  49.7  0.00001  Burkholderia sp. 383  Bacteria  normal  1  normal  0.104013 
 
 
-
 
NC_008543  Bcen2424_4235  5-carboxymethyl-2-hydroxymuconate isomerase  34.44 
 
 		 130 aa  48.9  0.00002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.226004  normal  0.0771683 
 
 
-
 
NC_010515  Bcenmc03_3282  5-carboxymethyl-2-hydroxymuconate isomerase  34.44 
 
 		 130 aa  48.9  0.00002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0116683  normal  0.241616 
 
 
-
 
NC_010552  BamMC406_4131  5-carboxymethyl-2-hydroxymuconate isomerase  30.77 
 
 		 130 aa  48.9  0.00002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0956828  normal  1 
 
 
-
 
NC_008061  Bcen_4131  5-carboxymethyl-2-hydroxymuconate isomerase  34.44 
 
 		 130 aa  48.9  0.00002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0346405  n/a   
 
 
-
 
NC_008782  Ajs_3495  5-carboxymethyl-2-hydroxymuconate isomerase  29.06 
 
 		 120 aa  48.5  0.00003  Acidovorax sp. JS42  Bacteria  normal  0.314238  normal  1 
 
 
-
 
NC_011992  Dtpsy_2818  5-carboxymethyl-2-hydroxymuconate isomerase  29.06 
 
 		 120 aa  48.5  0.00003  Acidovorax ebreus TPSY  Bacteria  normal  0.423818  n/a   
 
 
-
 
NC_007958  RPD_3590  5-carboxymethyl-2-hydroxymuconate isomerase  34.25 
 
 		 132 aa  48.1  0.00004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.421371  normal  0.741818 
 
 
-
 
NC_008781  Pnap_2718  5-carboxymethyl-2-hydroxymuconate isomerase  28.41 
 
 		 137 aa  47.4  0.00006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.179185 
 
 
-
 
NC_009654  Mmwyl1_3292  5-carboxymethyl-2-hydroxymuconate isomerase  28.83 
 
 		 116 aa  47  0.00008  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_3901  5-carboxymethyl-2-hydroxymuconate isomerase  33.33 
 
 		 121 aa  47  0.00008  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009524  PsycPRwf_0114  5-carboxymethyl-2-hydroxymuconate isomerase-like protein  35.63 
 
 		 124 aa  46.6  0.0001  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008391  Bamb_3657  5-carboxymethyl-2-hydroxymuconate isomerase  30.34 
 
 		 130 aa  46.2  0.0001  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.480508 
 
 
-
 
NC_009078  BURPS1106A_A0942  5-carboxymethyl-2-hydroxymuconate delta isomerase  25.62 
 
 		 130 aa  46.2  0.0002  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_3921  putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase  28.44 
 
 		 114 aa  45.1  0.0003  Colwellia psychrerythraea 34H  Bacteria  normal  0.850012  n/a   
 
 
-
 
NC_008254  Meso_2508  5-carboxymethyl-2-hydroxymuconate isomerase  33.33 
 
 		 127 aa  45.1  0.0003  Chelativorans sp. BNC1  Bacteria  normal  0.260692  n/a   
 
 
-
 
NC_009485  BBta_2940  putative 5-carboxymethyl-2-hydroxymuconate isomerase, HpcD-like protein  28.09 
 
 		 132 aa  44.7  0.0004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.731959  normal  1 
 
 
-
 
NC_007802  Jann_3504  5-carboxymethyl-2-hydroxymuconate isomerase  29.89 
 
 		 129 aa  45.1  0.0004  Jannaschia sp. CCS1  Bacteria  normal  1  hitchhiker  0.000217132 
 
 
-
 
NC_011004  Rpal_4280  5-carboxymethyl-2-hydroxymuconate isomerase  32.88 
 
 		 132 aa  45.1  0.0004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0353441  n/a   
 
 
-
 
NC_010682  Rpic_1956  5-carboxymethyl-2-hydroxymuconate isomerase  28.89 
 
 		 129 aa  44.7  0.0005  Ralstonia pickettii 12J  Bacteria  normal  0.394051  normal  0.050021 
 
 
-
 
NC_007778  RPB_1707  5-carboxymethyl-2-hydroxymuconate isomerase  31.51 
 
 		 132 aa  44.3  0.0006  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.214837  normal  0.557794 
 
 
-
 
NC_007435  BURPS1710b_A2268  5-carboxymethyl-2-hydroxymuconate delta isomerase  24.79 
 
 		 130 aa  43.9  0.0007  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1027  5-carboxymethyl-2-hydroxymuconate delta isomerase  24.79 
 
 		 130 aa  43.9  0.0007  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_0104  5-carboxymethyl-2-hydroxymuconate delta isomerase  24.79 
 
 		 130 aa  43.9  0.0007  Burkholderia mallei NCTC 10229  Bacteria  normal  0.325695  n/a   
 
 
-
 
NC_006349  BMAA1136  5-carboxymethyl-2-hydroxymuconate delta isomerase  24.79 
 
 		 130 aa  43.9  0.0007  Burkholderia mallei ATCC 23344  Bacteria  normal  0.838487  n/a   
 
 
-
 
NC_009079  BMA10247_A1509  5-carboxymethyl-2-hydroxymuconate delta isomerase  24.79 
 
 		 130 aa  43.9  0.0007  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0875183  n/a   
 
 
-
 
NC_012856  Rpic12D_1628  5-carboxymethyl-2-hydroxymuconate isomerase  30 
 
 		 129 aa  43.5  0.0009  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.689916 
 
 
-
 
NC_009441  Fjoh_3391  hypothetical protein  25.23 
 
 		 114 aa  43.5  0.001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.100696  n/a   
 
 
-
 
NC_012892  B21_04193  hypothetical protein  24.17 
 
 		 126 aa  43.5  0.001  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_3846  5-carboxymethyl-2-hydroxymuconate isomerase  28.57 
 
 		 119 aa  43.5  0.001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.424362  normal  1 
 
 
-
 
NC_010468  EcolC_3705  5-carboxymethyl-2-hydroxymuconate isomerase  24.17 
 
 		 126 aa  43.5  0.001  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  0.263188 
 
 
-
 
CP001509  ECD_04227  5-carboxymethyl-2-hydroxymuconate delta-isomerase  24.17 
 
 		 126 aa  43.5  0.001  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_010658  SbBS512_E4887  5-carboxymethyl-2-hydroxymuconate delta isomerase  25 
 
 		 126 aa  42.4  0.002  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A4581  5-carboxymethyl-2-hydroxymuconate delta isomerase  25 
 
 		 126 aa  42.4  0.002  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_0973  5-carboxymethyl-2-hydroxymuconate isomerase  26.67 
 
 		 132 aa  42.4  0.002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II1731  5-carboxymethyl-2-hydroxymuconate delta isomerase  24.79 
 
 		 130 aa  42.7  0.002  Burkholderia thailandensis E264  Bacteria  normal  0.628874  n/a   
 
 
-
 
NC_010086  Bmul_4370  5-carboxymethyl-2-hydroxymuconate isomerase  25.62 
 
 		 130 aa  42  0.003  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.663355  normal  1 
 
 
-
 
NC_011004  Rpal_3395  5-carboxymethyl-2-hydroxymuconate isomerase  24.56 
 
 		 114 aa  41.2  0.004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0493493  n/a   
 
 
-
 
NC_007492  Pfl01_1384  5-carboxymethyl-2-hydroxymuconate isomerase  25.86 
 
 		 121 aa  41.6  0.004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_0137  5-carboxymethyl-2-hydroxymuconate isomerase  30.85 
 
 		 145 aa  40.8  0.006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_1831  5-carboxymethyl-2-hydroxymuconate isomerase  22.22 
 
 		 119 aa  40.4  0.009  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>