| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1340 |
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| Symbol | |
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| ID | 5109393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1499760 |
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| End bp | 1500113 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502568 |
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| Product | 5-carboxymethyl-2-hydroxymuconate isomerase-like protein |
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| Protein accession | YP_001186837 |
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| Protein GI | 146306372 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3232] 5-carboxymethyl-2-hydroxymuconate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.271195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCATT GCCTGATCGA GGCCGCCAGC GAGGTGGCCG AGTACATCGC GCCGCAGGCA
CTGGTGCAGT TGGTGCACGA TCAGGCGGCA GGCACTGGCC TGTTCCAGCC CGGTGAAGTC
AAGGTGCGCC TGAGTCTGTA CGAGCACCAC TGCGTCGGCG GCGAGGCGGG CCCGTTCGTG
CACCTGATCT TCTATCTGCT GGCGGGACGC AGCGATGACG ACAAGCGCGC GCTGTCGCGG
CGCATGGTGC GGGCGCTGGT GCAGCGCCTG CCGCAGGTGC CGGCGATCTC CCTGGACGTG
CGCGACATTC GCCGTGAGGT GTTCGGCAAC CGGCGCAACT GCCAGGAGGA TTAA
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| Protein sequence | MPHCLIEAAS EVAEYIAPQA LVQLVHDQAA GTGLFQPGEV KVRLSLYEHH CVGGEAGPFV
HLIFYLLAGR SDDDKRALSR RMVRALVQRL PQVPAISLDV RDIRREVFGN RRNCQED
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