77 homologs were found in PanDaTox collection
for query gene Bphyt_5828 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010676  Bphyt_5828  5-carboxymethyl-2-hydroxymuconate isomerase  100 
 
 		 133 aa  268  2e-71  Burkholderia phytofirmans PsJN  Bacteria  normal  0.374293  normal  0.270362 
 
 
-
 
NC_007952  Bxe_B2032  5-carboxymethyl-2-hydroxymuconate isomerase(HpcD)  89.05 
 
 		 137 aa  245  2e-64  Burkholderia xenovorans LB400  Bacteria  normal  0.488422  normal  0.194085 
 
 
-
 
NC_007650  BTH_II1731  5-carboxymethyl-2-hydroxymuconate delta isomerase  51.15 
 
 		 130 aa  140  7e-33  Burkholderia thailandensis E264  Bacteria  normal  0.628874  n/a   
 
 
-
 
NC_010086  Bmul_4370  5-carboxymethyl-2-hydroxymuconate isomerase  51.15 
 
 		 130 aa  139  9.999999999999999e-33  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.663355  normal  1 
 
 
-
 
NC_009079  BMA10247_A1509  5-carboxymethyl-2-hydroxymuconate delta isomerase  51.15 
 
 		 130 aa  138  3e-32  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0875183  n/a   
 
 
-
 
NC_009075  BURPS668_A1027  5-carboxymethyl-2-hydroxymuconate delta isomerase  51.15 
 
 		 130 aa  138  3e-32  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA1136  5-carboxymethyl-2-hydroxymuconate delta isomerase  51.15 
 
 		 130 aa  138  3e-32  Burkholderia mallei ATCC 23344  Bacteria  normal  0.838487  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2268  5-carboxymethyl-2-hydroxymuconate delta isomerase  51.15 
 
 		 130 aa  138  3e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_0104  5-carboxymethyl-2-hydroxymuconate delta isomerase  51.15 
 
 		 130 aa  138  3e-32  Burkholderia mallei NCTC 10229  Bacteria  normal  0.325695  n/a   
 
 
-
 
NC_008391  Bamb_3657  5-carboxymethyl-2-hydroxymuconate isomerase  49.62 
 
 		 130 aa  136  8.999999999999999e-32  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.480508 
 
 
-
 
NC_013411  GYMC61_3108  5-carboxymethyl-2-hydroxymuconate isomerase  51.52 
 
 		 128 aa  135  2e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010682  Rpic_1956  5-carboxymethyl-2-hydroxymuconate isomerase  48.85 
 
 		 129 aa  134  3.0000000000000003e-31  Ralstonia pickettii 12J  Bacteria  normal  0.394051  normal  0.050021 
 
 
-
 
NC_009078  BURPS1106A_A0942  5-carboxymethyl-2-hydroxymuconate delta isomerase  50.38 
 
 		 130 aa  134  5e-31  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_010552  BamMC406_4131  5-carboxymethyl-2-hydroxymuconate isomerase  48.09 
 
 		 130 aa  134  5e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0956828  normal  1 
 
 
-
 
NC_010515  Bcenmc03_3282  5-carboxymethyl-2-hydroxymuconate isomerase  48.85 
 
 		 130 aa  131  1.9999999999999998e-30  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0116683  normal  0.241616 
 
 
-
 
NC_008061  Bcen_4131  5-carboxymethyl-2-hydroxymuconate isomerase  48.85 
 
 		 130 aa  131  1.9999999999999998e-30  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0346405  n/a   
 
 
-
 
NC_008543  Bcen2424_4235  5-carboxymethyl-2-hydroxymuconate isomerase  48.85 
 
 		 130 aa  131  1.9999999999999998e-30  Burkholderia cenocepacia HI2424  Bacteria  normal  0.226004  normal  0.0771683 
 
 
-
 
NC_007511  Bcep18194_B1779  5-carboxymethyl-2-hydroxymuconate isomerase  48.09 
 
 		 130 aa  132  1.9999999999999998e-30  Burkholderia sp. 383  Bacteria  normal  1  normal  0.104013 
 
 
-
 
NC_012856  Rpic12D_1628  5-carboxymethyl-2-hydroxymuconate isomerase  47.33 
 
 		 129 aa  130  6.999999999999999e-30  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.689916 
 
 
-
 
NC_009674  Bcer98_0973  5-carboxymethyl-2-hydroxymuconate isomerase  41.98 
 
 		 132 aa  115  1.9999999999999998e-25  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_4312  5-carboxymethyl-2-hydroxymuconate isomerase  44.27 
 
 		 130 aa  114  3e-25  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_2940  putative 5-carboxymethyl-2-hydroxymuconate isomerase, HpcD-like protein  41.35 
 
 		 132 aa  108  3e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.731959  normal  1 
 
 
-
 
NC_004311  BRA1162  5-carboxymethyl-2-hydroxymuconate delta isomerase  38.93 
 
 		 130 aa  106  9.000000000000001e-23  Brucella suis 1330  Bacteria  normal  0.837994  n/a   
 
 
-
 
NC_009504  BOV_A1065  5-carboxymethyl-2-hydroxymuconate delta isomerase  38.93 
 
 		 130 aa  105  2e-22  Brucella ovis ATCC 25840  Bacteria  normal  0.0224972  n/a   
 
 
-
 
NC_003295  RSc2419  putative 5-carboxymethyl-2-hydroxymuconate DELTA-isomerase protein  40.77 
 
 		 134 aa  104  3e-22  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_3590  5-carboxymethyl-2-hydroxymuconate isomerase  41.35 
 
 		 132 aa  104  4e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.421371  normal  0.741818 
 
 
-
 
NC_010682  Rpic_2683  5-carboxymethyl-2-hydroxymuconate isomerase  40.77 
 
 		 133 aa  103  7e-22  Ralstonia pickettii 12J  Bacteria  normal  0.510772  normal  1 
 
 
-
 
NC_011004  Rpal_4280  5-carboxymethyl-2-hydroxymuconate isomerase  40.6 
 
 		 132 aa  103  9e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0353441  n/a   
 
 
-
 
NC_008781  Pnap_0137  5-carboxymethyl-2-hydroxymuconate isomerase  39.69 
 
 		 145 aa  102  1e-21  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_2223  5-carboxymethyl-2-hydroxymuconate isomerase  40 
 
 		 133 aa  102  1e-21  Ralstonia pickettii 12D  Bacteria  normal  0.910475  normal  1 
 
 
-
 
NC_007948  Bpro_0199  5-carboxymethyl-2-hydroxymuconate isomerase  41.35 
 
 		 137 aa  102  1e-21  Polaromonas sp. JS666  Bacteria  normal  0.478927  normal  1 
 
 
-
 
NC_007778  RPB_1707  5-carboxymethyl-2-hydroxymuconate isomerase  41.35 
 
 		 132 aa  102  2e-21  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.214837  normal  0.557794 
 
 
-
 
CP001509  ECD_04227  5-carboxymethyl-2-hydroxymuconate delta-isomerase  41.98 
 
 		 126 aa  100  1e-20  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_3705  5-carboxymethyl-2-hydroxymuconate isomerase  41.98 
 
 		 126 aa  100  1e-20  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  0.263188 
 
 
-
 
NC_012892  B21_04193  hypothetical protein  41.98 
 
 		 126 aa  100  1e-20  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_0967  5-carboxymethyl-2-hydroxymuconate isomerase  39.69 
 
 		 130 aa  97.8  4e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_011094  SeSA_A1168  5-carboxymethyl-2-hydroxymuconate delta isomerase  41.98 
 
 		 126 aa  98.2  4e-20  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.205401  normal  1 
 
 
-
 
NC_011083  SeHA_C1214  5-carboxymethyl-2-hydroxymuconate delta isomerase  41.98 
 
 		 126 aa  98.2  4e-20  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.171475  normal  1 
 
 
-
 
NC_011149  SeAg_B1063  5-carboxymethyl-2-hydroxymuconate delta isomerase  41.98 
 
 		 126 aa  97.1  7e-20  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A1179  5-carboxymethyl-2-hydroxymuconate delta isomerase  41.98 
 
 		 126 aa  97.1  7e-20  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.898893  normal  1 
 
 
-
 
NC_011368  Rleg2_4440  5-carboxymethyl-2-hydroxymuconate isomerase  45.11 
 
 		 128 aa  97.1  7e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.436322 
 
 
-
 
NC_009800  EcHS_A4581  5-carboxymethyl-2-hydroxymuconate delta isomerase  42.75 
 
 		 126 aa  97.1  8e-20  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010658  SbBS512_E4887  5-carboxymethyl-2-hydroxymuconate delta isomerase  42.75 
 
 		 126 aa  97.1  8e-20  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_10610  5-carboxymethyl-2-hydroxymuconate isomerase  38.93 
 
 		 130 aa  96.7  1e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.650129  normal  1 
 
 
-
 
NC_011080  SNSL254_A1199  5-carboxymethyl-2-hydroxymuconate delta isomerase  41.22 
 
 		 126 aa  92.8  1e-18  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.682145  normal  0.701788 
 
 
-
 
NC_008254  Meso_2508  5-carboxymethyl-2-hydroxymuconate isomerase  39.69 
 
 		 127 aa  89.7  1e-17  Chelativorans sp. BNC1  Bacteria  normal  0.260692  n/a   
 
 
-
 
NC_009832  Spro_0629  5-carboxymethyl-2-hydroxymuconate isomerase  36.84 
 
 		 128 aa  89.4  1e-17  Serratia proteamaculans 568  Bacteria  normal  0.701898  normal  1 
 
 
-
 
NC_010322  PputGB1_3500  5-carboxymethyl-2-hydroxymuconate isomerase  35.11 
 
 		 134 aa  88.2  4e-17  Pseudomonas putida GB-1  Bacteria  normal  0.479993  normal  1 
 
 
-
 
NC_012791  Vapar_0241  5-carboxymethyl-2-hydroxymuconate isomerase  39.53 
 
 		 134 aa  87.8  4e-17  Variovorax paradoxus S110  Bacteria  normal  0.640465  n/a   
 
 
-
 
NC_010465  YPK_2457  5-carboxymethyl-2-hydroxymuconate isomerase  45.16 
 
 		 132 aa  85.9  2e-16  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.557413  n/a   
 
 
-
 
NC_009708  YpsIP31758_2361  5-carboxymethyl-2-hydroxymuconate delta isomerase  45.16 
 
 		 132 aa  85.9  2e-16  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.662974  n/a   
 
 
-
 
NC_010159  YpAngola_A1644  5-carboxymethyl-2-hydroxymuconate delta-isomerase  45.16 
 
 		 132 aa  85.9  2e-16  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_3173  5-carboxymethyl-2-hydroxymuconate isomerase  33.59 
 
 		 126 aa  84  6e-16  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00000163889  normal  1 
 
 
-
 
NC_007925  RPC_1694  5-carboxymethyl-2-hydroxymuconate isomerase  34.56 
 
 		 155 aa  82.4  0.000000000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008043  TM1040_3469  5-carboxymethyl-2-hydroxymuconate isomerase  32.79 
 
 		 131 aa  73.6  0.0000000000008  Ruegeria sp. TM1040  Bacteria  normal  0.220005  normal  1 
 
 
-
 
NC_007802  Jann_3504  5-carboxymethyl-2-hydroxymuconate isomerase  31.58 
 
 		 129 aa  72.8  0.000000000001  Jannaschia sp. CCS1  Bacteria  normal  1  hitchhiker  0.000217132 
 
 
-
 
NC_010002  Daci_0102  5-carboxymethyl-2-hydroxymuconate isomerase  33.09 
 
 		 144 aa  70.5  0.000000000007  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_2718  5-carboxymethyl-2-hydroxymuconate isomerase  30.16 
 
 		 137 aa  68.9  0.00000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.179185 
 
 
-
 
NC_007511  Bcep18194_B0126  5-carboxymethyl-2-hydroxymuconate isomerase  37.39 
 
 		 136 aa  61.6  0.000000004  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_1831  5-carboxymethyl-2-hydroxymuconate isomerase  29.51 
 
 		 119 aa  52.4  0.000002  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_1603  5-carboxymethyl-2-hydroxymuconate isomerase  35.48 
 
 		 114 aa  51.2  0.000005  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00936983  n/a   
 
 
-
 
NC_009831  Ssed_1837  5-carboxymethyl-2-hydroxymuconate isomerase  27.64 
 
 		 117 aa  47.8  0.00004  Shewanella sediminis HAW-EB3  Bacteria  normal  0.60746  normal  1 
 
 
-
 
NC_008782  Ajs_3495  5-carboxymethyl-2-hydroxymuconate isomerase  33 
 
 		 120 aa  48.1  0.00004  Acidovorax sp. JS42  Bacteria  normal  0.314238  normal  1 
 
 
-
 
NC_011992  Dtpsy_2818  5-carboxymethyl-2-hydroxymuconate isomerase  33 
 
 		 120 aa  48.1  0.00004  Acidovorax ebreus TPSY  Bacteria  normal  0.423818  n/a   
 
 
-
 
NC_013456  VEA_001759  5-carboxymethyl-2-hydroxymuconate delta-isomerase  27.37 
 
 		 115 aa  46.2  0.0001  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_3825  5-carboxymethyl-2-hydroxymuconate isomerase  31.31 
 
 		 121 aa  46.6  0.0001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0512515  n/a   
 
 
-
 
NC_009092  Shew_1507  5-carboxymethyl-2-hydroxymuconate isomerase  34.15 
 
 		 115 aa  46.2  0.0001  Shewanella loihica PV-4  Bacteria  normal  0.0110902  normal  0.8408 
 
 
-
 
NC_009783  VIBHAR_00710  hypothetical protein  25.26 
 
 		 115 aa  46.6  0.0001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007969  Pcryo_0147  putative 5-carboxymethyl-2-hydroxymuconate isomerase  26.89 
 
 		 124 aa  44.7  0.0004  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011312  VSAL_I0284  5-carboxymethyl-2-hydroxymuconate isomerase  23.66 
 
 		 116 aa  43.5  0.001  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A2242  putative 5-carboxymethyl-2-hydroxymuconate delta isomerase  24.73 
 
 		 116 aa  42.4  0.002  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_007204  Psyc_0136  hypothetical protein  26.89 
 
 		 124 aa  42.4  0.002  Psychrobacter arcticus 273-4  Bacteria  normal  1  normal  0.250505 
 
 
-
 
NC_007298  Daro_2149  5-carboxymethyl-2-hydroxymuconate isomerase  31.25 
 
 		 120 aa  42  0.003  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.339839 
 
 
-
 
NC_010506  Swoo_0976  5-carboxymethyl-2-hydroxymuconate isomerase  35.05 
 
 		 111 aa  41.6  0.004  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.872717 
 
 
-
 
NC_008700  Sama_2103  putative 5-carboxymethyl-2-hydroxymuconate D-isomerase  25.41 
 
 		 113 aa  40.8  0.007  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.733883 
 
 
-
 
NC_007778  RPB_2522  5-carboxymethyl-2-hydroxymuconate delta isomerase  27.87 
 
 		 115 aa  40.8  0.007  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_3846  5-carboxymethyl-2-hydroxymuconate isomerase  29.17 
 
 		 119 aa  40.4  0.008  Acidovorax citrulli AAC00-1  Bacteria  normal  0.424362  normal  1 
 
 
-
 
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