32 homologs were found in PanDaTox collection
for query gene Psyc_0136 on replicon NC_007204
Organism: Psychrobacter arcticus 273-4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007204  Psyc_0136  hypothetical protein  100 
 
 		 124 aa  256  9e-68  Psychrobacter arcticus 273-4  Bacteria  normal  1  normal  0.250505 
 
 
-
 
NC_007969  Pcryo_0147  putative 5-carboxymethyl-2-hydroxymuconate isomerase  93.55 
 
 		 124 aa  243  8e-64  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009524  PsycPRwf_0114  5-carboxymethyl-2-hydroxymuconate isomerase-like protein  54.62 
 
 		 124 aa  144  6e-34  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B4052  5-carboxymethyl-2-hydroxymuconate isomerase  37.6 
 
 		 123 aa  74.3  0.0000000000005  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007511  Bcep18194_B0126  5-carboxymethyl-2-hydroxymuconate isomerase  37.17 
 
 		 136 aa  70.1  0.000000000009  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_1384  5-carboxymethyl-2-hydroxymuconate isomerase  35.54 
 
 		 121 aa  67  0.00000000008  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_2149  5-carboxymethyl-2-hydroxymuconate isomerase  31.67 
 
 		 120 aa  62.8  0.000000001  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.339839 
 
 
-
 
NC_010501  PputW619_3901  5-carboxymethyl-2-hydroxymuconate isomerase  35.4 
 
 		 121 aa  62.4  0.000000002  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4733  5-carboxymethyl-2-hydroxymuconate isomerase  30.65 
 
 		 144 aa  58.5  0.00000003  Cupriavidus metallidurans CH34  Bacteria  normal  0.154366  normal  0.594326 
 
 
-
 
NC_010002  Daci_1831  5-carboxymethyl-2-hydroxymuconate isomerase  28.23 
 
 		 119 aa  52.4  0.000002  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_3846  5-carboxymethyl-2-hydroxymuconate isomerase  29.35 
 
 		 119 aa  45.1  0.0003  Acidovorax citrulli AAC00-1  Bacteria  normal  0.424362  normal  1 
 
 
-
 
NC_007954  Sden_1896  hypothetical protein  38.67 
 
 		 161 aa  45.1  0.0003  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_3495  5-carboxymethyl-2-hydroxymuconate isomerase  30.11 
 
 		 120 aa  45.1  0.0004  Acidovorax sp. JS42  Bacteria  normal  0.314238  normal  1 
 
 
-
 
NC_011992  Dtpsy_2818  5-carboxymethyl-2-hydroxymuconate isomerase  30.11 
 
 		 120 aa  45.1  0.0004  Acidovorax ebreus TPSY  Bacteria  normal  0.423818  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0942  5-carboxymethyl-2-hydroxymuconate delta isomerase  28.7 
 
 		 130 aa  43.1  0.001  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II1731  5-carboxymethyl-2-hydroxymuconate delta isomerase  29.91 
 
 		 130 aa  43.1  0.001  Burkholderia thailandensis E264  Bacteria  normal  0.628874  n/a   
 
 
-
 
NC_009832  Spro_0629  5-carboxymethyl-2-hydroxymuconate isomerase  29.37 
 
 		 128 aa  43.5  0.001  Serratia proteamaculans 568  Bacteria  normal  0.701898  normal  1 
 
 
-
 
NC_010676  Bphyt_5828  5-carboxymethyl-2-hydroxymuconate isomerase  26.89 
 
 		 133 aa  42.4  0.002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.374293  normal  0.270362 
 
 
-
 
NC_009656  PSPA7_0967  5-carboxymethyl-2-hydroxymuconate isomerase  29.03 
 
 		 130 aa  42.4  0.002  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_10610  5-carboxymethyl-2-hydroxymuconate isomerase  29.03 
 
 		 130 aa  42  0.003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.650129  normal  1 
 
 
-
 
NC_003910  CPS_3921  putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase  28.57 
 
 		 114 aa  42  0.003  Colwellia psychrerythraea 34H  Bacteria  normal  0.850012  n/a   
 
 
-
 
NC_007511  Bcep18194_B1779  5-carboxymethyl-2-hydroxymuconate isomerase  29.06 
 
 		 130 aa  41.2  0.005  Burkholderia sp. 383  Bacteria  normal  1  normal  0.104013 
 
 
-
 
NC_009674  Bcer98_0973  5-carboxymethyl-2-hydroxymuconate isomerase  22.61 
 
 		 132 aa  41.2  0.005  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA1136  5-carboxymethyl-2-hydroxymuconate delta isomerase  29.06 
 
 		 130 aa  40.8  0.006  Burkholderia mallei ATCC 23344  Bacteria  normal  0.838487  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2268  5-carboxymethyl-2-hydroxymuconate delta isomerase  29.06 
 
 		 130 aa  40.8  0.006  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A1509  5-carboxymethyl-2-hydroxymuconate delta isomerase  29.06 
 
 		 130 aa  40.8  0.006  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0875183  n/a   
 
 
-
 
NC_009075  BURPS668_A1027  5-carboxymethyl-2-hydroxymuconate delta isomerase  29.06 
 
 		 130 aa  40.8  0.006  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_0104  5-carboxymethyl-2-hydroxymuconate delta isomerase  29.06 
 
 		 130 aa  40.8  0.006  Burkholderia mallei NCTC 10229  Bacteria  normal  0.325695  n/a   
 
 
-
 
NC_010086  Bmul_4370  5-carboxymethyl-2-hydroxymuconate isomerase  28.21 
 
 		 130 aa  40.8  0.007  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.663355  normal  1 
 
 
-
 
NC_007952  Bxe_B2032  5-carboxymethyl-2-hydroxymuconate isomerase(HpcD)  28.8 
 
 		 137 aa  40.8  0.007  Burkholderia xenovorans LB400  Bacteria  normal  0.488422  normal  0.194085 
 
 
-
 
NC_009800  EcHS_A4581  5-carboxymethyl-2-hydroxymuconate delta isomerase  30.47 
 
 		 126 aa  40.4  0.009  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010658  SbBS512_E4887  5-carboxymethyl-2-hydroxymuconate delta isomerase  30.47 
 
 		 126 aa  40.4  0.009  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
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