Gene Pfl01_1384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1384 
Symbol 
ID3717217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1557202 
End bp1557567 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content60% 
IMG OID 
Product5-carboxymethyl-2-hydroxymuconate isomerase 
Protein accessionYP_347116 
Protein GI77457611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACC TGCACCTGGA ATACACCGCC AACCTGCCGC AACTGAACGC CGATGTTGCG 
TTGATCCGGC TCAACAACAC CCTGGTGGGT TCCGGTCAAT TCGGGGCGGA ATTCGATATC
AAGAGCCGTG CGTTCAAAGT TGAAACCTTC AAGGTCGGCA CCGCCATGAA CGAGCGCGCC
TTTGTCGCGG TCAGGCTGGC GCTGCTCAGC GGGCGTTCCC CGGAAATCAA GAAGCAACTG
TCGCAGAGCC TGTTGGCGGT ATTGCAGGAA TTGTGCGAAT GGCCGGCCGG GGTCGAGGTG
CAGTTGAGTG TGGAACTGCT CGACATCGAC CGCGAGTCCT ACAGCAAAGT CGCCATCGGC
GTGTAG
 
Protein sequence
MPHLHLEYTA NLPQLNADVA LIRLNNTLVG SGQFGAEFDI KSRAFKVETF KVGTAMNERA 
FVAVRLALLS GRSPEIKKQL SQSLLAVLQE LCEWPAGVEV QLSVELLDID RESYSKVAIG
V