41 homologs were found in PanDaTox collection
for query gene CPS_3921 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003910  CPS_3921  putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase  100 
 
 		 114 aa  237  4e-62  Colwellia psychrerythraea 34H  Bacteria  normal  0.850012  n/a   
 
 
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NC_007954  Sden_1896  hypothetical protein  57.02 
 
 		 161 aa  139  9.999999999999999e-33  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
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NC_009441  Fjoh_3391  hypothetical protein  50.88 
 
 		 114 aa  126  9.000000000000001e-29  Flavobacterium johnsoniae UW101  Bacteria  normal  0.100696  n/a   
 
 
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NC_011004  Rpal_3395  5-carboxymethyl-2-hydroxymuconate isomerase  36.94 
 
 		 114 aa  84  6e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0493493  n/a   
 
 
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NC_007778  RPB_2522  5-carboxymethyl-2-hydroxymuconate delta isomerase  34.23 
 
 		 115 aa  79.7  0.00000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
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NC_009439  Pmen_1340  5-carboxymethyl-2-hydroxymuconate isomerase-like protein  28.83 
 
 		 117 aa  77.4  0.00000000000006  Pseudomonas mendocina ymp  Bacteria  normal  0.271195  normal  1 
 
 
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NC_011312  VSAL_I0284  5-carboxymethyl-2-hydroxymuconate isomerase  33.64 
 
 		 116 aa  75.1  0.0000000000003  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
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NC_009654  Mmwyl1_3292  5-carboxymethyl-2-hydroxymuconate isomerase  32.46 
 
 		 116 aa  73.2  0.000000000001  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_2103  putative 5-carboxymethyl-2-hydroxymuconate D-isomerase  32.41 
 
 		 113 aa  65.9  0.0000000002  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.733883 
 
 
-
 
NC_013456  VEA_001759  5-carboxymethyl-2-hydroxymuconate delta-isomerase  29.09 
 
 		 115 aa  64.7  0.0000000004  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
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NC_009092  Shew_1507  5-carboxymethyl-2-hydroxymuconate isomerase  32.14 
 
 		 115 aa  64.3  0.0000000005  Shewanella loihica PV-4  Bacteria  normal  0.0110902  normal  0.8408 
 
 
-
 
NC_009457  VC0395_A2242  putative 5-carboxymethyl-2-hydroxymuconate delta isomerase  30.19 
 
 		 116 aa  63.5  0.000000001  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_00710  hypothetical protein  28.3 
 
 		 115 aa  61.6  0.000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_0976  5-carboxymethyl-2-hydroxymuconate isomerase  31.53 
 
 		 111 aa  62  0.000000003  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.872717 
 
 
-
 
NC_008228  Patl_2612  putative 5-carboxymethyl-2-hydroxymuconate delta isomerase  27.27 
 
 		 113 aa  59.7  0.00000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_1831  5-carboxymethyl-2-hydroxymuconate isomerase  23.68 
 
 		 119 aa  55.1  0.0000004  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_3901  5-carboxymethyl-2-hydroxymuconate isomerase  26.05 
 
 		 121 aa  51.2  0.000005  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_1837  5-carboxymethyl-2-hydroxymuconate isomerase  30.28 
 
 		 117 aa  50.4  0.000009  Shewanella sediminis HAW-EB3  Bacteria  normal  0.60746  normal  1 
 
 
-
 
NC_011205  SeD_A1179  5-carboxymethyl-2-hydroxymuconate delta isomerase  24.21 
 
 		 126 aa  48.5  0.00003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.898893  normal  1 
 
 
-
 
NC_012892  B21_04193  hypothetical protein  24.21 
 
 		 126 aa  48.5  0.00003  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_3846  5-carboxymethyl-2-hydroxymuconate isomerase  25.83 
 
 		 119 aa  48.9  0.00003  Acidovorax citrulli AAC00-1  Bacteria  normal  0.424362  normal  1 
 
 
-
 
NC_011149  SeAg_B1063  5-carboxymethyl-2-hydroxymuconate delta isomerase  24.21 
 
 		 126 aa  48.5  0.00003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011094  SeSA_A1168  5-carboxymethyl-2-hydroxymuconate delta isomerase  24.21 
 
 		 126 aa  48.5  0.00003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.205401  normal  1 
 
 
-
 
NC_011083  SeHA_C1214  5-carboxymethyl-2-hydroxymuconate delta isomerase  24.21 
 
 		 126 aa  48.5  0.00003  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.171475  normal  1 
 
 
-
 
NC_010468  EcolC_3705  5-carboxymethyl-2-hydroxymuconate isomerase  24.21 
 
 		 126 aa  48.5  0.00003  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  0.263188 
 
 
-
 
CP001509  ECD_04227  5-carboxymethyl-2-hydroxymuconate delta-isomerase  24.21 
 
 		 126 aa  48.5  0.00003  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_011080  SNSL254_A1199  5-carboxymethyl-2-hydroxymuconate delta isomerase  25.26 
 
 		 126 aa  48.1  0.00004  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.682145  normal  0.701788 
 
 
-
 
NC_007511  Bcep18194_B0126  5-carboxymethyl-2-hydroxymuconate isomerase  27.73 
 
 		 136 aa  47.8  0.00006  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009674  Bcer98_0973  5-carboxymethyl-2-hydroxymuconate isomerase  26.5 
 
 		 132 aa  46.2  0.0001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A4581  5-carboxymethyl-2-hydroxymuconate delta isomerase  24.53 
 
 		 126 aa  46.2  0.0002  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010658  SbBS512_E4887  5-carboxymethyl-2-hydroxymuconate delta isomerase  24.53 
 
 		 126 aa  46.2  0.0002  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4733  5-carboxymethyl-2-hydroxymuconate isomerase  24.35 
 
 		 144 aa  45.8  0.0002  Cupriavidus metallidurans CH34  Bacteria  normal  0.154366  normal  0.594326 
 
 
-
 
NC_009901  Spea_1603  5-carboxymethyl-2-hydroxymuconate isomerase  28.44 
 
 		 114 aa  45.1  0.0003  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00936983  n/a   
 
 
-
 
NC_009656  PSPA7_3330  hypothetical protein  22.88 
 
 		 123 aa  45.1  0.0003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.590634  n/a   
 
 
-
 
NC_008463  PA14_39100  hypothetical protein  21.67 
 
 		 123 aa  45.1  0.0004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.649441 
 
 
-
 
NC_007298  Daro_2149  5-carboxymethyl-2-hydroxymuconate isomerase  25.22 
 
 		 120 aa  44.3  0.0006  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.339839 
 
 
-
 
NC_007969  Pcryo_0147  putative 5-carboxymethyl-2-hydroxymuconate isomerase  30.77 
 
 		 124 aa  42.7  0.002  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007204  Psyc_0136  hypothetical protein  28.57 
 
 		 124 aa  42  0.003  Psychrobacter arcticus 273-4  Bacteria  normal  1  normal  0.250505 
 
 
-
 
NC_011992  Dtpsy_2818  5-carboxymethyl-2-hydroxymuconate isomerase  20.83 
 
 		 120 aa  42  0.003  Acidovorax ebreus TPSY  Bacteria  normal  0.423818  n/a   
 
 
-
 
NC_008782  Ajs_3495  5-carboxymethyl-2-hydroxymuconate isomerase  20.83 
 
 		 120 aa  42  0.003  Acidovorax sp. JS42  Bacteria  normal  0.314238  normal  1 
 
 
-
 
NC_007348  Reut_B4052  5-carboxymethyl-2-hydroxymuconate isomerase  21.55 
 
 		 123 aa  41.2  0.005  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
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