| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2612 |
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| Symbol | |
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| ID | 4174372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3173898 |
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| End bp | 3174239 |
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| Gene Length | 342 bp |
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| Protein Length | 113 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638055633 |
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| Product | putative 5-carboxymethyl-2-hydroxymuconate delta isomerase |
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| Protein accession | YP_662181 |
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| Protein GI | 109898926 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3232] 5-carboxymethyl-2-hydroxymuconate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAAATT TTGTTATCGA ATACAGTGCG CCGTTAGAAC AACAAATTAA TGAAGACACG
CTGATGGACA GCGTCTTTGA AGGGGCTAAA AATAGCGGTC ACTTTCCGCC AGAGGCGATA
AAACTCAGAA TAGAAAAACG CAGTGGCTTT CGTTTACACG ACAAGCAAAA GGACTTTTTA
CATATTTCGG CGCATATTCT AAGCGGAAGA AACGACGAGC AAAAGAGTGA AATCTCTAAC
GCTGTGTTAG CTGAACTTAA AAAGCTAACC TTGAACAGTG TATTTGTATC GGTAGAAGTA
GTTGATATAC ACAGGGCCAG TTTCGTAGAT TTTGCGTTCT GA
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| Protein sequence | MPNFVIEYSA PLEQQINEDT LMDSVFEGAK NSGHFPPEAI KLRIEKRSGF RLHDKQKDFL
HISAHILSGR NDEQKSEISN AVLAELKKLT LNSVFVSVEV VDIHRASFVD FAF
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