60 homologs were found in PanDaTox collection
for query gene Pnap_0137 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008781  Pnap_0137  5-carboxymethyl-2-hydroxymuconate isomerase  100 
 
 		 145 aa  295  1e-79  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_0199  5-carboxymethyl-2-hydroxymuconate isomerase  79.55 
 
 		 137 aa  213  5.9999999999999996e-55  Polaromonas sp. JS666  Bacteria  normal  0.478927  normal  1 
 
 
-
 
NC_012791  Vapar_0241  5-carboxymethyl-2-hydroxymuconate isomerase  56.25 
 
 		 134 aa  136  1e-31  Variovorax paradoxus S110  Bacteria  normal  0.640465  n/a   
 
 
-
 
NC_010002  Daci_0102  5-carboxymethyl-2-hydroxymuconate isomerase  47.45 
 
 		 144 aa  121  3e-27  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_3500  5-carboxymethyl-2-hydroxymuconate isomerase  45.31 
 
 		 134 aa  114  3e-25  Pseudomonas putida GB-1  Bacteria  normal  0.479993  normal  1 
 
 
-
 
NC_010676  Bphyt_5828  5-carboxymethyl-2-hydroxymuconate isomerase  39.69 
 
 		 133 aa  102  1e-21  Burkholderia phytofirmans PsJN  Bacteria  normal  0.374293  normal  0.270362 
 
 
-
 
NC_007952  Bxe_B2032  5-carboxymethyl-2-hydroxymuconate isomerase(HpcD)  40.3 
 
 		 137 aa  99.4  1e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.488422  normal  0.194085 
 
 
-
 
NC_009485  BBta_2940  putative 5-carboxymethyl-2-hydroxymuconate isomerase, HpcD-like protein  36.43 
 
 		 132 aa  87.8  5e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.731959  normal  1 
 
 
-
 
NC_003295  RSc2419  putative 5-carboxymethyl-2-hydroxymuconate DELTA-isomerase protein  41.74 
 
 		 134 aa  85.9  2e-16  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_3504  5-carboxymethyl-2-hydroxymuconate isomerase  35.11 
 
 		 129 aa  85.5  2e-16  Jannaschia sp. CCS1  Bacteria  normal  1  hitchhiker  0.000217132 
 
 
-
 
NC_010086  Bmul_4370  5-carboxymethyl-2-hydroxymuconate isomerase  35.43 
 
 		 130 aa  84  6e-16  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.663355  normal  1 
 
 
-
 
NC_008061  Bcen_4131  5-carboxymethyl-2-hydroxymuconate isomerase  35.43 
 
 		 130 aa  84  6e-16  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0346405  n/a   
 
 
-
 
NC_010515  Bcenmc03_3282  5-carboxymethyl-2-hydroxymuconate isomerase  35.43 
 
 		 130 aa  84  6e-16  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0116683  normal  0.241616 
 
 
-
 
NC_008543  Bcen2424_4235  5-carboxymethyl-2-hydroxymuconate isomerase  35.43 
 
 		 130 aa  84  6e-16  Burkholderia cenocepacia HI2424  Bacteria  normal  0.226004  normal  0.0771683 
 
 
-
 
NC_007511  Bcep18194_B1779  5-carboxymethyl-2-hydroxymuconate isomerase  33.86 
 
 		 130 aa  82.4  0.000000000000002  Burkholderia sp. 383  Bacteria  normal  1  normal  0.104013 
 
 
-
 
NC_011004  Rpal_4280  5-carboxymethyl-2-hydroxymuconate isomerase  35.4 
 
 		 132 aa  81.3  0.000000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0353441  n/a   
 
 
-
 
NC_011368  Rleg2_4440  5-carboxymethyl-2-hydroxymuconate isomerase  44.35 
 
 		 128 aa  80.9  0.000000000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.436322 
 
 
-
 
NC_007650  BTH_II1731  5-carboxymethyl-2-hydroxymuconate delta isomerase  33.86 
 
 		 130 aa  80.5  0.000000000000007  Burkholderia thailandensis E264  Bacteria  normal  0.628874  n/a   
 
 
-
 
NC_008391  Bamb_3657  5-carboxymethyl-2-hydroxymuconate isomerase  33.07 
 
 		 130 aa  80.5  0.000000000000007  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.480508 
 
 
-
 
NC_007778  RPB_1707  5-carboxymethyl-2-hydroxymuconate isomerase  32.28 
 
 		 132 aa  79.7  0.00000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.214837  normal  0.557794 
 
 
-
 
NC_010552  BamMC406_4131  5-carboxymethyl-2-hydroxymuconate isomerase  32.28 
 
 		 130 aa  79.3  0.00000000000001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0956828  normal  1 
 
 
-
 
NC_007435  BURPS1710b_A2268  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.28 
 
 		 130 aa  77.4  0.00000000000006  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA1136  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.28 
 
 		 130 aa  77.4  0.00000000000006  Burkholderia mallei ATCC 23344  Bacteria  normal  0.838487  n/a   
 
 
-
 
NC_009079  BMA10247_A1509  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.28 
 
 		 130 aa  77.4  0.00000000000006  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0875183  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0942  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.28 
 
 		 130 aa  77.4  0.00000000000006  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1027  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.28 
 
 		 130 aa  77.4  0.00000000000006  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_0104  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.28 
 
 		 130 aa  77.4  0.00000000000006  Burkholderia mallei NCTC 10229  Bacteria  normal  0.325695  n/a   
 
 
-
 
NC_007958  RPD_3590  5-carboxymethyl-2-hydroxymuconate isomerase  32.28 
 
 		 132 aa  77.4  0.00000000000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.421371  normal  0.741818 
 
 
-
 
NC_004311  BRA1162  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.82 
 
 		 130 aa  76.6  0.00000000000009  Brucella suis 1330  Bacteria  normal  0.837994  n/a   
 
 
-
 
NC_009504  BOV_A1065  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.82 
 
 		 130 aa  76.3  0.0000000000001  Brucella ovis ATCC 25840  Bacteria  normal  0.0224972  n/a   
 
 
-
 
NC_010682  Rpic_2683  5-carboxymethyl-2-hydroxymuconate isomerase  38.26 
 
 		 133 aa  76.6  0.0000000000001  Ralstonia pickettii 12J  Bacteria  normal  0.510772  normal  1 
 
 
-
 
NC_010682  Rpic_1956  5-carboxymethyl-2-hydroxymuconate isomerase  33.85 
 
 		 129 aa  75.5  0.0000000000003  Ralstonia pickettii 12J  Bacteria  normal  0.394051  normal  0.050021 
 
 
-
 
NC_013411  GYMC61_3108  5-carboxymethyl-2-hydroxymuconate isomerase  34.65 
 
 		 128 aa  74.7  0.0000000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012856  Rpic12D_1628  5-carboxymethyl-2-hydroxymuconate isomerase  33.85 
 
 		 129 aa  74.3  0.0000000000005  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.689916 
 
 
-
 
NC_012856  Rpic12D_2223  5-carboxymethyl-2-hydroxymuconate isomerase  36.52 
 
 		 133 aa  73.6  0.0000000000008  Ralstonia pickettii 12D  Bacteria  normal  0.910475  normal  1 
 
 
-
 
NC_008043  TM1040_3469  5-carboxymethyl-2-hydroxymuconate isomerase  29.55 
 
 		 131 aa  73.2  0.000000000001  Ruegeria sp. TM1040  Bacteria  normal  0.220005  normal  1 
 
 
-
 
NC_008781  Pnap_2718  5-carboxymethyl-2-hydroxymuconate isomerase  32.56 
 
 		 137 aa  73.2  0.000000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.179185 
 
 
-
 
NC_009511  Swit_4312  5-carboxymethyl-2-hydroxymuconate isomerase  31.5 
 
 		 130 aa  73.2  0.000000000001  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010658  SbBS512_E4887  5-carboxymethyl-2-hydroxymuconate delta isomerase  30.71 
 
 		 126 aa  70.5  0.000000000008  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A4581  5-carboxymethyl-2-hydroxymuconate delta isomerase  30.71 
 
 		 126 aa  70.5  0.000000000008  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_1694  5-carboxymethyl-2-hydroxymuconate isomerase  32.74 
 
 		 155 aa  70.1  0.00000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_3173  5-carboxymethyl-2-hydroxymuconate isomerase  31.5 
 
 		 126 aa  68.2  0.00000000003  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00000163889  normal  1 
 
 
-
 
NC_010465  YPK_2457  5-carboxymethyl-2-hydroxymuconate isomerase  32.54 
 
 		 132 aa  67.8  0.00000000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.557413  n/a   
 
 
-
 
NC_011094  SeSA_A1168  5-carboxymethyl-2-hydroxymuconate delta isomerase  30.71 
 
 		 126 aa  67.8  0.00000000004  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.205401  normal  1 
 
 
-
 
NC_011083  SeHA_C1214  5-carboxymethyl-2-hydroxymuconate delta isomerase  30.71 
 
 		 126 aa  67.8  0.00000000004  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.171475  normal  1 
 
 
-
 
NC_009708  YpsIP31758_2361  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.54 
 
 		 132 aa  67.8  0.00000000004  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.662974  n/a   
 
 
-
 
NC_010159  YpAngola_A1644  5-carboxymethyl-2-hydroxymuconate delta-isomerase  32.54 
 
 		 132 aa  67.8  0.00000000004  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011080  SNSL254_A1199  5-carboxymethyl-2-hydroxymuconate delta isomerase  30.71 
 
 		 126 aa  67.4  0.00000000006  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.682145  normal  0.701788 
 
 
-
 
NC_011149  SeAg_B1063  5-carboxymethyl-2-hydroxymuconate delta isomerase  30.71 
 
 		 126 aa  67.4  0.00000000007  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A1179  5-carboxymethyl-2-hydroxymuconate delta isomerase  30.71 
 
 		 126 aa  67.4  0.00000000007  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.898893  normal  1 
 
 
-
 
NC_008254  Meso_2508  5-carboxymethyl-2-hydroxymuconate isomerase  38.14 
 
 		 127 aa  67  0.00000000009  Chelativorans sp. BNC1  Bacteria  normal  0.260692  n/a   
 
 
-
 
NC_009674  Bcer98_0973  5-carboxymethyl-2-hydroxymuconate isomerase  28.35 
 
 		 132 aa  63.5  0.0000000008  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_10610  5-carboxymethyl-2-hydroxymuconate isomerase  29.01 
 
 		 130 aa  63.2  0.000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.650129  normal  1 
 
 
-
 
NC_009656  PSPA7_0967  5-carboxymethyl-2-hydroxymuconate isomerase  29.01 
 
 		 130 aa  63.5  0.000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_012892  B21_04193  hypothetical protein  28.35 
 
 		 126 aa  62.8  0.000000002  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
CP001509  ECD_04227  5-carboxymethyl-2-hydroxymuconate delta-isomerase  28.35 
 
 		 126 aa  62.8  0.000000002  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_3705  5-carboxymethyl-2-hydroxymuconate isomerase  28.35 
 
 		 126 aa  62.8  0.000000002  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  0.263188 
 
 
-
 
NC_009832  Spro_0629  5-carboxymethyl-2-hydroxymuconate isomerase  29.13 
 
 		 128 aa  61.2  0.000000004  Serratia proteamaculans 568  Bacteria  normal  0.701898  normal  1 
 
 
-
 
NC_007511  Bcep18194_B0126  5-carboxymethyl-2-hydroxymuconate isomerase  33.66 
 
 		 136 aa  44.7  0.0005  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_1603  5-carboxymethyl-2-hydroxymuconate isomerase  30.85 
 
 		 114 aa  40.8  0.006  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00936983  n/a   
 
 
-
 
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