| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1707 |
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| Symbol | |
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| ID | 3908232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1942898 |
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| End bp | 1943296 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883601 |
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| Product | 5-carboxymethyl-2-hydroxymuconate isomerase |
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| Protein accession | YP_485326 |
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| Protein GI | 86748830 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3232] 5-carboxymethyl-2-hydroxymuconate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.214837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.557794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCATT TCACCATCGA ATATTCCGCC AATCTGGAGG ACCGCGTCGA GATGGCGGCC
GTCGTCGAAC TGGTCCGCGG CACCGCGATC GAGACCGGGA TCTTTCCGGT CGGCGGCGTG
CGTGTCCGCG CGATCCGCTG CGAGCACTAC GCCATCGCCG ATGGCCGCGC CGGCTTCGCC
TTCCTCGCGA TGCTGCTGCG GCTCGGCGAA GGCCGCGACC TCGCCGCACG CAAGCGCGCC
GGCGAGCACA TCTTTTCCGA GCTGTCGCGC TATCTCGACC CGCTGTTCGC CGATGAAGGT
TTCGCGCTGT CGTTCGACAT GCAGATCAAC GACAAAGAGA CCTCCTGGAA GCGAAACTCG
ATCCACGATC TTCTGATTGC CGAGGCGCGC CATGGCTGA
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| Protein sequence | MPHFTIEYSA NLEDRVEMAA VVELVRGTAI ETGIFPVGGV RVRAIRCEHY AIADGRAGFA
FLAMLLRLGE GRDLAARKRA GEHIFSELSR YLDPLFADEG FALSFDMQIN DKETSWKRNS
IHDLLIAEAR HG
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