63 homologs were found in PanDaTox collection
for query gene Amir_3825 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_3825  5-carboxymethyl-2-hydroxymuconate isomerase  100 
 
 		 121 aa  237  2.9999999999999997e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0512515  n/a   
 
 
-
 
NC_007511  Bcep18194_B0126  5-carboxymethyl-2-hydroxymuconate isomerase  39.5 
 
 		 136 aa  72.4  0.000000000002  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_1384  5-carboxymethyl-2-hydroxymuconate isomerase  34.96 
 
 		 121 aa  61.6  0.000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_1603  5-carboxymethyl-2-hydroxymuconate isomerase  30.43 
 
 		 114 aa  57.8  0.00000005  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00936983  n/a   
 
 
-
 
NC_007298  Daro_2149  5-carboxymethyl-2-hydroxymuconate isomerase  32.77 
 
 		 120 aa  57.4  0.00000006  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.339839 
 
 
-
 
NC_013411  GYMC61_3108  5-carboxymethyl-2-hydroxymuconate isomerase  33.04 
 
 		 128 aa  57  0.00000009  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I0284  5-carboxymethyl-2-hydroxymuconate isomerase  29.31 
 
 		 116 aa  56.2  0.0000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II1731  5-carboxymethyl-2-hydroxymuconate delta isomerase  33.85 
 
 		 130 aa  56.6  0.0000001  Burkholderia thailandensis E264  Bacteria  normal  0.628874  n/a   
 
 
-
 
NC_009783  VIBHAR_00710  hypothetical protein  29.66 
 
 		 115 aa  55.8  0.0000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_0967  5-carboxymethyl-2-hydroxymuconate isomerase  29.03 
 
 		 130 aa  55.5  0.0000002  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_10610  5-carboxymethyl-2-hydroxymuconate isomerase  29.03 
 
 		 130 aa  55.1  0.0000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.650129  normal  1 
 
 
-
 
NC_010501  PputW619_3901  5-carboxymethyl-2-hydroxymuconate isomerase  33.05 
 
 		 121 aa  55.1  0.0000004  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008835  BMA10229_0104  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.31 
 
 		 130 aa  53.5  0.000001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.325695  n/a   
 
 
-
 
NC_009075  BURPS668_A1027  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.31 
 
 		 130 aa  53.5  0.000001  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0942  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.31 
 
 		 130 aa  53.5  0.000001  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A1509  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.31 
 
 		 130 aa  53.5  0.000001  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0875183  n/a   
 
 
-
 
NC_009654  Mmwyl1_3173  5-carboxymethyl-2-hydroxymuconate isomerase  27.03 
 
 		 126 aa  52.8  0.000001  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00000163889  normal  1 
 
 
-
 
NC_007435  BURPS1710b_A2268  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.31 
 
 		 130 aa  53.5  0.000001  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA1136  5-carboxymethyl-2-hydroxymuconate delta isomerase  32.31 
 
 		 130 aa  53.5  0.000001  Burkholderia mallei ATCC 23344  Bacteria  normal  0.838487  n/a   
 
 
-
 
NC_010552  BamMC406_4131  5-carboxymethyl-2-hydroxymuconate isomerase  30.33 
 
 		 130 aa  50.8  0.000006  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0956828  normal  1 
 
 
-
 
NC_013456  VEA_001759  5-carboxymethyl-2-hydroxymuconate delta-isomerase  27.97 
 
 		 115 aa  50.1  0.00001  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_007348  Reut_B4052  5-carboxymethyl-2-hydroxymuconate isomerase  41.27 
 
 		 123 aa  50.1  0.00001  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_0973  5-carboxymethyl-2-hydroxymuconate isomerase  26.09 
 
 		 132 aa  49.3  0.00002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_3282  5-carboxymethyl-2-hydroxymuconate isomerase  30.33 
 
 		 130 aa  48.9  0.00002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0116683  normal  0.241616 
 
 
-
 
NC_010086  Bmul_4370  5-carboxymethyl-2-hydroxymuconate isomerase  30.33 
 
 		 130 aa  49.3  0.00002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.663355  normal  1 
 
 
-
 
NC_008782  Ajs_3495  5-carboxymethyl-2-hydroxymuconate isomerase  31.36 
 
 		 120 aa  49.3  0.00002  Acidovorax sp. JS42  Bacteria  normal  0.314238  normal  1 
 
 
-
 
NC_011992  Dtpsy_2818  5-carboxymethyl-2-hydroxymuconate isomerase  31.36 
 
 		 120 aa  49.3  0.00002  Acidovorax ebreus TPSY  Bacteria  normal  0.423818  n/a   
 
 
-
 
NC_008061  Bcen_4131  5-carboxymethyl-2-hydroxymuconate isomerase  30.33 
 
 		 130 aa  48.9  0.00002  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0346405  n/a   
 
 
-
 
NC_008391  Bamb_3657  5-carboxymethyl-2-hydroxymuconate isomerase  30.33 
 
 		 130 aa  48.9  0.00002  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.480508 
 
 
-
 
NC_008543  Bcen2424_4235  5-carboxymethyl-2-hydroxymuconate isomerase  30.33 
 
 		 130 aa  48.9  0.00002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.226004  normal  0.0771683 
 
 
-
 
NC_007511  Bcep18194_B1779  5-carboxymethyl-2-hydroxymuconate isomerase  30.33 
 
 		 130 aa  47.8  0.00005  Burkholderia sp. 383  Bacteria  normal  1  normal  0.104013 
 
 
-
 
NC_007952  Bxe_B2032  5-carboxymethyl-2-hydroxymuconate isomerase(HpcD)  29.75 
 
 		 137 aa  47.4  0.00007  Burkholderia xenovorans LB400  Bacteria  normal  0.488422  normal  0.194085 
 
 
-
 
NC_009457  VC0395_A2242  putative 5-carboxymethyl-2-hydroxymuconate delta isomerase  24.58 
 
 		 116 aa  47.4  0.00008  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_1628  5-carboxymethyl-2-hydroxymuconate isomerase  30.33 
 
 		 129 aa  46.6  0.0001  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.689916 
 
 
-
 
NC_010676  Bphyt_5828  5-carboxymethyl-2-hydroxymuconate isomerase  31.31 
 
 		 133 aa  46.6  0.0001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.374293  normal  0.270362 
 
 
-
 
NC_004311  BRA1162  5-carboxymethyl-2-hydroxymuconate delta isomerase  27.27 
 
 		 130 aa  46.6  0.0001  Brucella suis 1330  Bacteria  normal  0.837994  n/a   
 
 
-
 
NC_008752  Aave_3846  5-carboxymethyl-2-hydroxymuconate isomerase  32.79 
 
 		 119 aa  46.6  0.0001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.424362  normal  1 
 
 
-
 
NC_009504  BOV_A1065  5-carboxymethyl-2-hydroxymuconate delta isomerase  28.46 
 
 		 130 aa  45.8  0.0002  Brucella ovis ATCC 25840  Bacteria  normal  0.0224972  n/a   
 
 
-
 
NC_009831  Ssed_1837  5-carboxymethyl-2-hydroxymuconate isomerase  24.79 
 
 		 117 aa  46.2  0.0002  Shewanella sediminis HAW-EB3  Bacteria  normal  0.60746  normal  1 
 
 
-
 
NC_008700  Sama_2103  putative 5-carboxymethyl-2-hydroxymuconate D-isomerase  24.79 
 
 		 113 aa  45.4  0.0002  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.733883 
 
 
-
 
NC_012856  Rpic12D_2223  5-carboxymethyl-2-hydroxymuconate isomerase  28.45 
 
 		 133 aa  45.1  0.0003  Ralstonia pickettii 12D  Bacteria  normal  0.910475  normal  1 
 
 
-
 
NC_010682  Rpic_1956  5-carboxymethyl-2-hydroxymuconate isomerase  31.45 
 
 		 129 aa  45.4  0.0003  Ralstonia pickettii 12J  Bacteria  normal  0.394051  normal  0.050021 
 
 
-
 
NC_003295  RSc2419  putative 5-carboxymethyl-2-hydroxymuconate DELTA-isomerase protein  30.17 
 
 		 134 aa  45.4  0.0003  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_1831  5-carboxymethyl-2-hydroxymuconate isomerase  30.33 
 
 		 119 aa  45.1  0.0004  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_3590  5-carboxymethyl-2-hydroxymuconate isomerase  28.23 
 
 		 132 aa  44.7  0.0004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.421371  normal  0.741818 
 
 
-
 
NC_010682  Rpic_2683  5-carboxymethyl-2-hydroxymuconate isomerase  28.45 
 
 		 133 aa  44.3  0.0006  Ralstonia pickettii 12J  Bacteria  normal  0.510772  normal  1 
 
 
-
 
NC_010506  Swoo_0976  5-carboxymethyl-2-hydroxymuconate isomerase  30.83 
 
 		 111 aa  42.4  0.002  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.872717 
 
 
-
 
NC_009092  Shew_1507  5-carboxymethyl-2-hydroxymuconate isomerase  22.22 
 
 		 115 aa  42.4  0.002  Shewanella loihica PV-4  Bacteria  normal  0.0110902  normal  0.8408 
 
 
-
 
NC_007778  RPB_2522  5-carboxymethyl-2-hydroxymuconate delta isomerase  30.83 
 
 		 115 aa  42  0.003  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
CP001509  ECD_04227  5-carboxymethyl-2-hydroxymuconate delta-isomerase  26.27 
 
 		 126 aa  41.6  0.004  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_3705  5-carboxymethyl-2-hydroxymuconate isomerase  26.27 
 
 		 126 aa  41.6  0.004  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  0.263188 
 
 
-
 
NC_011004  Rpal_4280  5-carboxymethyl-2-hydroxymuconate isomerase  26.61 
 
 		 132 aa  41.6  0.004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0353441  n/a   
 
 
-
 
NC_012892  B21_04193  hypothetical protein  26.27 
 
 		 126 aa  41.6  0.004  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_3292  5-carboxymethyl-2-hydroxymuconate isomerase  28.35 
 
 		 116 aa  41.2  0.004  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011083  SeHA_C1214  5-carboxymethyl-2-hydroxymuconate delta isomerase  25.42 
 
 		 126 aa  41.2  0.005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.171475  normal  1 
 
 
-
 
NC_011094  SeSA_A1168  5-carboxymethyl-2-hydroxymuconate delta isomerase  25.42 
 
 		 126 aa  41.2  0.005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.205401  normal  1 
 
 
-
 
NC_009656  PSPA7_3330  hypothetical protein  30.83 
 
 		 123 aa  41.2  0.005  Pseudomonas aeruginosa PA7  Bacteria  normal  0.590634  n/a   
 
 
-
 
NC_011205  SeD_A1179  5-carboxymethyl-2-hydroxymuconate delta isomerase  25.42 
 
 		 126 aa  40.8  0.006  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.898893  normal  1 
 
 
-
 
NC_011149  SeAg_B1063  5-carboxymethyl-2-hydroxymuconate delta isomerase  25.42 
 
 		 126 aa  40.8  0.006  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A4581  5-carboxymethyl-2-hydroxymuconate delta isomerase  24.58 
 
 		 126 aa  40.8  0.007  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010658  SbBS512_E4887  5-carboxymethyl-2-hydroxymuconate delta isomerase  24.58 
 
 		 126 aa  40.8  0.007  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_011368  Rleg2_4440  5-carboxymethyl-2-hydroxymuconate isomerase  28.93 
 
 		 128 aa  40.4  0.008  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.436322 
 
 
-
 
NC_011004  Rpal_3395  5-carboxymethyl-2-hydroxymuconate isomerase  28.81 
 
 		 114 aa  40.4  0.008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0493493  n/a   
 
 
-
 
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