| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1603 |
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| Symbol | |
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| ID | 5662000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1942164 |
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| End bp | 1942508 |
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| Gene Length | 345 bp |
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| Protein Length | 114 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236191 |
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| Product | 5-carboxymethyl-2-hydroxymuconate isomerase |
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| Protein accession | YP_001501463 |
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| Protein GI | 157961429 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3232] 5-carboxymethyl-2-hydroxymuconate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00936983 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCACATT GTACGATTGA ATATTCCGCC CCACTAGCCG AAGTGCTATC GATTGAAGCG
CTAGTCAGTG CAATTCACCG AGGCCTGAGT GAAACTGAGT TATTTGAACC GCAAACGATA
AAGACGCGGG CCCTTCGTTG TGATTTCTTT CAGGTTGGCG AAGAGGAGGG CGCTCAATTC
ATTCATCTTA ATATTGCTAT CATGCCTGGG CGCAGCGATG AGCAGAAAGC TATGCTGCTT
GAGCGAGTCT ATGATGCTAT CGCCCTAATA ACCTCAACGG TGAATAGTGT GACTTTAGAA
GTAGTGGATA TTAAACAGCA GCACTATTTT AAGGCACTAA ATTAA
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| Protein sequence | MPHCTIEYSA PLAEVLSIEA LVSAIHRGLS ETELFEPQTI KTRALRCDFF QVGEEEGAQF
IHLNIAIMPG RSDEQKAMLL ERVYDAIALI TSTVNSVTLE VVDIKQQHYF KALN
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