18 homologs were found in PanDaTox collection
for query gene Snas_5342 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013947  Snas_5342  putative transcriptional regulator, TetR family  100 
 
 		 198 aa  385  1e-106  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.744613 
 
 
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NC_014210  Ndas_4093  transcriptional regulator, TetR family  59.59 
 
 		 200 aa  213  1.9999999999999998e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.370117  normal  0.493128 
 
 
-
 
NC_014165  Tbis_1759  TetR family transcriptional regulator  43.82 
 
 		 199 aa  120  9e-27  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5337  putative transcriptional regulator, TetR family  39.7 
 
 		 215 aa  114  1.0000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.532852  normal  1 
 
 
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NC_013947  Snas_2870  transcriptional regulator, TetR family  37.76 
 
 		 197 aa  112  5e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0570859  normal  1 
 
 
-
 
NC_009921  Franean1_4140  TetR family transcriptional regulator  43.27 
 
 		 200 aa  110  1.0000000000000001e-23  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.278605 
 
 
-
 
NC_013093  Amir_5295  transcriptional regulator, TetR family  39.88 
 
 		 189 aa  105  4e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_2383  transcriptional regulator, TetR family  37.56 
 
 		 193 aa  93.6  2e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_2164  transcriptional regulator, TetR family  36.18 
 
 		 199 aa  90.9  1e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.652576  normal  0.0672199 
 
 
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NC_013595  Sros_2536  putative transcriptional regulator, TetR family  34.94 
 
 		 215 aa  66.2  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_3229  putative transcriptional regulator, TetR family  28.57 
 
 		 206 aa  58.2  0.00000008  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.446849 
 
 
-
 
NC_013093  Amir_1972  transcriptional regulator, TetR family  29.89 
 
 		 203 aa  49.7  0.00003  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000120212  n/a   
 
 
-
 
NC_013159  Svir_19280  transcriptional regulator  34.38 
 
 		 235 aa  48.1  0.00008  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.28299  normal  0.286722 
 
 
-
 
NC_011729  PCC7424_3129  transcriptional regulator, TetR family  28.42 
 
 		 191 aa  44.3  0.001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_013440  Hoch_6137  transcriptional regulator, TetR family  32.17 
 
 		 196 aa  43.1  0.003  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.780623 
 
 
-
 
NC_009674  Bcer98_1394  TetR family transcriptional regulator  27.18 
 
 		 185 aa  42.4  0.005  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.546688  n/a   
 
 
-
 
NC_009664  Krad_4321  regulatory protein TetR  44.23 
 
 		 194 aa  41.6  0.008  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0684654  normal  0.242009 
 
 
-
 
NC_007802  Jann_1309  TetR family transcriptional regulator  40 
 
 		 222 aa  41.2  0.009  Jannaschia sp. CCS1  Bacteria  normal  0.488116  normal  1 
 
 
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