Gene Amir_5295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5295 
Symbol 
ID8329497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6293798 
End bp6294367 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content76% 
IMG OID644945734 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102962 
Protein GI256379302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCACAG GCGTGGCGAT CCAGGACGCG CGCAACCAGC TCTTCGACGC CGCCGAGCGA 
GTCCTGCTCC GCGACGGCCC CAGCGGCCTC ACCAGCCGTG CCGTCACCAC CGAGGCGTCC 
TTCGCCAAGG GCGTCCTGCA CCGCCACTTC GCGGACTTCG ACGCGTTCCT CGCCGAGTTC 
GTCCTCGACC GCGCCGCCCG CCCCACCCCC GAGGTCGAGA GCCTCCCCGA CCAGGTCGGC 
CGCGCCGAGG TGGTCGACAA CCTCACCTCC GCCCTCACCG CCCTCTACGC CTCGGCCGCG 
GTCGCCGTCG TCCCCCTGCT CACCTTCCGC ACCGCCCTCC GCGACCGCCT CCGCGACGCC 
TGGCCCGCAG GCGTCCCGGT CCTCACCGAC GCCGCCGTCC GCATCACCGC CTACCTCGAC 
GCCGAGCGCG CCGCGGGCCG CCTCCCCGAC ACCCTCCCCG CCGACGCCCT CGGTCCCGCG 
CTCGTCGGCT CCACCCACCT CCTGCACACC GGCCCCGGCG CCACCGAGGA CGCCGTCCGG 
CGCGTCGTCG CCACGGTCCT GCGGGTGTGA
 
Protein sequence
MPTGVAIQDA RNQLFDAAER VLLRDGPSGL TSRAVTTEAS FAKGVLHRHF ADFDAFLAEF 
VLDRAARPTP EVESLPDQVG RAEVVDNLTS ALTALYASAA VAVVPLLTFR TALRDRLRDA 
WPAGVPVLTD AAVRITAYLD AERAAGRLPD TLPADALGPA LVGSTHLLHT GPGATEDAVR 
RVVATVLRV