| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1309 |
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| Symbol | |
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| ID | 3933756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1268946 |
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| End bp | 1269614 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637903659 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_509251 |
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| Protein GI | 89053800 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.488116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAGAGC TTCTTACTTT GACAAGGGTT ACGAAGTCTG AAAGCACTTG GATCATGAAA
AAACAAAAAG AAACGTCTGC TCGCGCCAGC TATCACCATG GCGATCTTCG CGCGCAATTG
ATCGAAGCCA CGCGCCACTT GGTTGAAGAA AAAGGGCCCG ATCACTTGTC AGTGTCAGAG
GCCTGCCGTC GCGCAGGTGT GTCGACGGCG GCGCCCTACA AGCATTTCAG GGACAAAGAT
GATCTGCTCC GCGCCGTGGC ATTCGAGGGG ATGGAGCGTC AGCACGCTCA AATGCTTGAA
GCGATCGAGC CCCTGCCCGA ACGCGACCTT GCCAGGTTCT CTGCATTGGG TCGTGTCTAC
ATTGGGTTCG CCCAGACCGA ACCTGCGGTG TTCCGCCTGA TGTTTGGCCT ATCAGAGGAT
CATGCAGATG ATGAAGCACT GGTAGCGAAA GGGCGCAGCA CCTTTGGGAT TGTGCAAACG
GAAGCCGCGG CCTTCCGGGG CAGCGACACC GTCGAAGACA TCGATCTACG CCGCGCTTTT
CAACTGTGGA GCTTCGTGCA CGGACTGGCA TTTTTGTTGA TCGACGGAAA ACTGCAGCAA
ATGGATTTGC CTTTGGATCT GGAGGATATG CTCGATGATA TTGGGCGGAA GGTGATGCTG
GAGGAATGA
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| Protein sequence | MLELLTLTRV TKSESTWIMK KQKETSARAS YHHGDLRAQL IEATRHLVEE KGPDHLSVSE
ACRRAGVSTA APYKHFRDKD DLLRAVAFEG MERQHAQMLE AIEPLPERDL ARFSALGRVY
IGFAQTEPAV FRLMFGLSED HADDEALVAK GRSTFGIVQT EAAAFRGSDT VEDIDLRRAF
QLWSFVHGLA FLLIDGKLQQ MDLPLDLEDM LDDIGRKVML EE
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