16 homologs were found in PanDaTox collection
for query gene Sde_2040 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007912  Sde_2040  hypothetical protein  100 
 
 		 100 aa  203  8e-52  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_0476  XRE family transcriptional regulator  44.78 
 
 		 157 aa  59.7  0.00000001  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010333  Caul_5343  XRE family transcriptional regulator  41.79 
 
 		 110 aa  58.9  0.00000002  Caulobacter sp. K31  Bacteria  normal  1  normal  0.992998 
 
 
-
 
NC_011984  Avi_9055  hypothetical protein  35.29 
 
 		 111 aa  51.6  0.000004  Agrobacterium vitis S4  Bacteria  normal  0.142837  n/a   
 
 
-
 
NC_009483  Gura_2092  XRE family transcriptional regulator  30.49 
 
 		 115 aa  50.1  0.000009  Geobacter uraniireducens Rf4  Bacteria  normal  0.209801  n/a   
 
 
-
 
NC_013132  Cpin_2058  transcriptional regulator, XRE family  35.53 
 
 		 112 aa  49.7  0.00001  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007512  Plut_1840  XRE family transcriptional regulator  37.68 
 
 		 111 aa  48.9  0.00002  Chlorobium luteolum DSM 273  Bacteria  normal  0.69218  normal  1 
 
 
-
 
NC_007963  Csal_0225  hypothetical protein  35.29 
 
 		 111 aa  49.3  0.00002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_0227  transcriptional regulator, XRE family  35.21 
 
 		 113 aa  45.1  0.0003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_007949  Bpro_5011  XRE family transcriptional regulator  28.99 
 
 		 126 aa  43.1  0.001  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.86875 
 
 
-
 
NC_007948  Bpro_0677  XRE family transcriptional regulator  33.77 
 
 		 276 aa  42.4  0.002  Polaromonas sp. JS666  Bacteria  normal  0.244102  normal  0.779012 
 
 
-
 
NC_009483  Gura_1136  helix-turn-helix domain-containing protein  36.36 
 
 		 77 aa  42.4  0.002  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_7390  putative DNA binding protein  36.54 
 
 		 79 aa  42.4  0.002  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008391  Bamb_5438  XRE family transcriptional regulator  33.33 
 
 		 168 aa  41.6  0.004  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_2364  XRE family transcriptional regulator  32.14 
 
 		 114 aa  40.8  0.006  Nocardioides sp. JS614  Bacteria  normal  0.348863  n/a   
 
 
-
 
NC_010002  Daci_2319  XRE family transcriptional regulator  35.19 
 
 		 228 aa  40.4  0.008  Delftia acidovorans SPH-1  Bacteria  normal  0.288377  normal  0.478428 
 
 
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