| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2319 |
|---|
| Symbol | |
|---|
| ID | 5747882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 2553526 |
|---|
| End bp | 2554212 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641297401 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001563342 |
|---|
| Protein GI | 160897760 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1476] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.288377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.478428 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGC CAGAAAAATC CACCCTTCTT CAGCGCCAAC TGCTTTTGCA GTTCGGTGAC
CGGCTCAAGC GTCTGCGCAA GGAGCAGGGG CTGGGCACGG TCGAGATGGC CTCGCGCGTA
GGCATATCCC GCAGCACGCT CGCTGCAGTC GAGTCCGGCG ATCCCGGGCC ATCCATGGGC
ACGTACCTGC GAGTCATGTC GGAACTGGGC ATAGGGGGAG AATTGGTATT GCTGGCGGGC
GACGCCCTGC AGCCCTCGCC CGCAGGAACT GCCGCAGCCC GTTCGCGCCA TGCCAGGCCC
GTCGTACAGG TTCTGGTGCG TGCGCAGGAT GCGCGCCATG AAGTGCAGGA TCTGCAAAGC
TTGGCATTGC ATGAAGAAGC CGTGCGCCTT GTGCGATCTG ACCCGGCATT GCTGCAGCAG
GCACAGGACA CGTTGGAGAG GTGGCTGAGC CAGGGGGATT CGCATTCCGC CAGCCTGTGG
AGGCAGTGGC AGGATGTCTT GCAAAATGGC CGCTGGCGCA CCATCCTGGC CCGCACGCGA
AGGGCCCAGG AACTGCGCCA GGCCTCGCCC CTGACATCGG TGCTGCCCGA ACAGGTGCGC
CAGCAGATAC TGGCGCAGGT GGGGGATCTC AAGCGGGGCG TTGCATTGGG AGATACAGGG
CGGGCCTATG AACCGAGAGG ATCTTGA
|
|---|
| Protein sequence | MKTPEKSTLL QRQLLLQFGD RLKRLRKEQG LGTVEMASRV GISRSTLAAV ESGDPGPSMG
TYLRVMSELG IGGELVLLAG DALQPSPAGT AAARSRHARP VVQVLVRAQD ARHEVQDLQS
LALHEEAVRL VRSDPALLQQ AQDTLERWLS QGDSHSASLW RQWQDVLQNG RWRTILARTR
RAQELRQASP LTSVLPEQVR QQILAQVGDL KRGVALGDTG RAYEPRGS
|
|---|
| |