22 homologs were found in PanDaTox collection
for query gene Rfer_3385 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007908  Rfer_3385  XRE family transcriptional regulator  100 
 
 		 169 aa  334  2.9999999999999997e-91  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
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NC_008786  Veis_0718  XRE family transcriptional regulator  47.06 
 
 		 171 aa  146  1.0000000000000001e-34  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.764173  normal  1 
 
 
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NC_007949  Bpro_5088  XRE family transcriptional regulator  42.26 
 
 		 167 aa  139  9.999999999999999e-33  Polaromonas sp. JS666  Bacteria  hitchhiker  0.0000165067  normal  1 
 
 
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NC_007949  Bpro_5036  XRE family transcriptional regulator  39.29 
 
 		 166 aa  121  6e-27  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
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NC_012792  Vapar_5848  transcriptional regulator, XRE family  35.54 
 
 		 176 aa  102  3e-21  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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NC_008061  Bcen_5240  XRE family transcriptional regulator  32.12 
 
 		 159 aa  90.9  7e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
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NC_008543  Bcen2424_5619  XRE family transcriptional regulator  32.12 
 
 		 159 aa  90.9  7e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  0.173792  normal  0.0387834 
 
 
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NC_007511  Bcep18194_B0072  XRE family transcriptional regulator  31.33 
 
 		 159 aa  80.9  0.000000000000008  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
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NC_007514  Cag_1274  XRE family transcriptional regulator  37.5 
 
 		 86 aa  48.9  0.00003  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.329441  n/a   
 
 
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NC_011060  Ppha_2047  transcriptional regulator, XRE family  34.72 
 
 		 83 aa  48.9  0.00003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
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NC_009012  Cthe_2461  XRE family transcriptional regulator  38.36 
 
 		 79 aa  48.1  0.00006  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00000100603  n/a   
 
 
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NC_008607  Ppro_3808  XRE family transcriptional regulator  34.38 
 
 		 80 aa  46.6  0.0001  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.0020912  n/a   
 
 
-
 
NC_007492  Pfl01_0204  XRE family transcriptional regulator  35.06 
 
 		 82 aa  44.3  0.0008  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013174  Jden_1274  transcriptional regulator, XRE family  37.84 
 
 		 212 aa  44.3  0.0008  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_0820  transcriptional regulator, XRE family  33.87 
 
 		 79 aa  43.9  0.001  Geobacter sp. M21  Bacteria  n/a    normal  0.0102782 
 
 
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NC_011126  HY04AAS1_1298  transcriptional regulator, XRE family  37.04 
 
 		 86 aa  43.5  0.001  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
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NC_013521  Sked_03640  predicted transcriptional regulator  39.13 
 
 		 98 aa  41.6  0.005  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.634668  normal  1 
 
 
-
 
NC_010815  Glov_3687  transcriptional regulator, XRE family  32.2 
 
 		 79 aa  41.2  0.006  Geobacter lovleyi SZ  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_4362  XRE family transcriptional regulator  45.1 
 
 		 69 aa  41.2  0.006  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_43580  DNA binding protein, XRE-like protein  35.71 
 
 		 85 aa  41.2  0.007  Azotobacter vinelandii DJ  Bacteria  normal  0.485824  n/a   
 
 
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NC_010002  Daci_0707  XRE family transcriptional regulator  38.24 
 
 		 104 aa  41.2  0.007  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
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NC_011775  BCG9842_0009  HTH-type transcriptional regulator SinR  30.19 
 
 		 60 aa  40.8  0.01  Bacillus cereus G9842  Bacteria  normal  1  n/a   
 
 
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