21 homologs were found in PanDaTox collection
for query gene Bpro_5088 on replicon NC_007949
Organism: Polaromonas sp. JS666



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007949  Bpro_5088  XRE family transcriptional regulator  100 
 
 		 167 aa  332  1e-90  Polaromonas sp. JS666  Bacteria  hitchhiker  0.0000165067  normal  1 
 
 
-
 
NC_007949  Bpro_5036  XRE family transcriptional regulator  69.46 
 
 		 166 aa  231  3e-60  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_3385  XRE family transcriptional regulator  42.26 
 
 		 169 aa  139  9.999999999999999e-33  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_0718  XRE family transcriptional regulator  37.43 
 
 		 171 aa  114  6.9999999999999995e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.764173  normal  1 
 
 
-
 
NC_008061  Bcen_5240  XRE family transcriptional regulator  35.37 
 
 		 159 aa  95.9  2e-19  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5619  XRE family transcriptional regulator  35.37 
 
 		 159 aa  95.9  2e-19  Burkholderia cenocepacia HI2424  Bacteria  normal  0.173792  normal  0.0387834 
 
 
-
 
NC_012792  Vapar_5848  transcriptional regulator, XRE family  35.54 
 
 		 176 aa  94.4  7e-19  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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NC_007511  Bcep18194_B0072  XRE family transcriptional regulator  33.13 
 
 		 159 aa  82.4  0.000000000000003  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_2575  XRE family transcriptional regulator  57.78 
 
 		 230 aa  45.8  0.0002  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.556687 
 
 
-
 
NC_011729  PCC7424_0346  transcriptional regulator of molybdate metabolism, XRE family  47.27 
 
 		 377 aa  44.7  0.0007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_008609  Ppro_1460  molybdate metabolism transcriptional regulator  55.26 
 
 		 368 aa  42.7  0.002  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_3290  transcriptional regulator, XRE family  42 
 
 		 67 aa  42.4  0.003  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.605967 
 
 
-
 
NC_009440  Msed_1725  helix-turn-helix domain-containing protein  37.74 
 
 		 299 aa  42.4  0.003  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
NC_010622  Bphy_0252  XRE family transcriptional regulator  35.62 
 
 		 90 aa  42.4  0.003  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007512  Plut_1892  XRE family transcriptional regulator  42.86 
 
 		 390 aa  42  0.004  Chlorobium luteolum DSM 273  Bacteria  normal  0.0261519  normal  1 
 
 
-
 
NC_009439  Pmen_4031  XRE family transcriptional regulator  38.1 
 
 		 88 aa  41.2  0.006  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.858841 
 
 
-
 
NC_011126  HY04AAS1_1298  transcriptional regulator, XRE family  38.3 
 
 		 86 aa  41.2  0.007  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013164  Apre_1799  transcriptional regulator, XRE family  37.29 
 
 		 78 aa  41.2  0.007  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_01120  hypothetical protein  36.36 
 
 		 84 aa  40.8  0.008  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010831  Cphamn1_0190  transcriptional regulator, XRE family  34.43 
 
 		 69 aa  40.8  0.009  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.000995138  normal  0.937814 
 
 
-
 
NC_008463  PA14_46710  putative transcriptional regulator  35 
 
 		 216 aa  40.8  0.009  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0037508  decreased coverage  0.000000167672 
 
 
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