| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5848 |
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| Symbol | |
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| ID | 7975899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 561346 |
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| End bp | 561876 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796427 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002947701 |
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| Protein GI | 239820516 |
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| COG category | [K] Transcription |
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| COG ID | [COG1476] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAATA TTTTAGACAA CATCTGGCTG TGCTCTGCCA TGAACCTCAT CGACATCGGC
CATGCCGTAC GAGCCCGACG TGCCGAACTG GGCTTGTCCC AAGCGCAGTT GGCGCACCTG
AGCGGCCTGT CCCGGCAAAC CCTGGTTGGC TTGGAAACCG GCGTCCTGGG CGATCTGGGT
GTCAATCGCG TGGGACAGGT GATGGCAGTG CTGGGGCTGG ACAGTCTCAA GCCGGATACG
CTGGCGCGGC GCAAGAAGCG TGGCCTGTGG ATGGCGGCCA AGACGGCCAG TGTCAGCTAT
GCGAGTGAAA TGGCGCCCGA GGCGCTCGAG CAAGCCCTGG CGAGCGGCGA CGTGCCGCCT
CCATTCGCCC CGCACCTGAC TCATTTGCTT GACGAAGCGC CTGTGCCGAT CATCGTGATG
GCAGTGGAGG AGACGGCCTC GCGCGCGCAC CTGCCGCCGC GGCAGATCTG GCGCAACGTG
GCGAAGTTGG CCGAATCCTT GTCCGTGCAC CGGCGGGCGC TGTGGGCATG A
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| Protein sequence | MSNILDNIWL CSAMNLIDIG HAVRARRAEL GLSQAQLAHL SGLSRQTLVG LETGVLGDLG
VNRVGQVMAV LGLDSLKPDT LARRKKRGLW MAAKTASVSY ASEMAPEALE QALASGDVPP
PFAPHLTHLL DEAPVPIIVM AVEETASRAH LPPRQIWRNV AKLAESLSVH RRALWA
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