More than 300 homologs were found in PanDaTox collection
for query gene Pnuc_1388 on replicon NC_009379
Organism: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012791  Vapar_1312  acyl-CoA dehydrogenase domain protein  80.26 
 
 
387 aa  658    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1388  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
389 aa  817    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6788  acyl-CoA dehydrogenase domain protein  78.42 
 
 
387 aa  642    Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1346  acyl-CoA dehydrogenase domain-containing protein  79.79 
 
 
387 aa  635    Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0583  acyl-CoA dehydrogenase-like  80.31 
 
 
387 aa  654    Polaromonas sp. JS666  Bacteria  normal  0.530732  normal 
 
 
-
 
NC_008786  Veis_4806  acyl-CoA dehydrogenase domain-containing protein  78.35 
 
 
390 aa  648    Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0972672  normal  0.132645 
 
 
-
 
NC_007952  Bxe_B2584  putative acyl-CoA dehydrogenase  78.59 
 
 
387 aa  648    Burkholderia xenovorans LB400  Bacteria  normal  0.289384  normal  0.276761 
 
 
-
 
NC_010676  Bphyt_6603  acyl-CoA dehydrogenase domain protein  78.59 
 
 
387 aa  649    Burkholderia phytofirmans PsJN  Bacteria  normal  0.884829  normal  0.0708806 
 
 
-
 
NC_008781  Pnap_2142  acyl-CoA dehydrogenase domain-containing protein  79.11 
 
 
387 aa  651    Polaromonas naphthalenivorans CJ2  Bacteria  normal  decreased coverage  0.00458594 
 
 
-
 
NC_011992  Dtpsy_0136  acyl-CoA dehydrogenase domain protein  75.06 
 
 
386 aa  628  1e-179  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0118  acyl-CoA dehydrogenase domain-containing protein  75.06 
 
 
386 aa  628  1e-179  Acidovorax sp. JS42  Bacteria  normal  normal  0.3812 
 
 
-
 
NC_010512  Bcenmc03_6853  acyl-CoA dehydrogenase domain-containing protein  78.7 
 
 
388 aa  630  1e-179  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_5974  acyl-CoA dehydrogenase domain-containing protein  80.05 
 
 
385 aa  629  1e-179  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6270  acyl-CoA dehydrogenase domain-containing protein  79.53 
 
 
385 aa  629  1e-179  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0928  acyl-CoA dehydrogenase domain protein  74.8 
 
 
387 aa  621  1e-177  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.327846  normal 
 
 
-
 
NC_011094  SeSA_A1009  acyl-CoA dehydrogenase domain protein  74.41 
 
 
387 aa  621  1e-177  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6654  acyl-CoA dehydrogenase domain-containing protein  77.95 
 
 
387 aa  620  1e-176  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_5810  acyl-CoA dehydrogenase-like  77.69 
 
 
401 aa  618  1e-176  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.120503  n/a   
 
 
-
 
NC_011083  SeHA_C0989  acyl-CoA dehydrogenase domain-containing protein  74.15 
 
 
387 aa  620  1e-176  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_6174  acyl-CoA dehydrogenase domain-containing protein  77.69 
 
 
401 aa  618  1e-176  Burkholderia cenocepacia HI2424  Bacteria  normal  0.785501  normal 
 
 
-
 
NC_011205  SeD_A0960  acyl-CoA dehydrogenase domain-containing protein  74.02 
 
 
387 aa  616  1e-175  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3542  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  76.25 
 
 
389 aa  608  1e-173  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4635  acyl-CoA dehydrogenase  76.3 
 
 
386 aa  610  1e-173  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0655  putative acyl-CoA dehydrogenase  76.12 
 
 
386 aa  608  1e-173  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.936999 
 
 
-
 
NC_008463  PA14_52900  acyl-CoA dehydrogenase  76.04 
 
 
386 aa  609  1e-173  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.461273  normal 
 
 
-
 
NC_010002  Daci_0198  acyl-CoA dehydrogenase domain-containing protein  77.43 
 
 
388 aa  607  9.999999999999999e-173  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2176  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  75.59 
 
 
387 aa  601  1.0000000000000001e-171  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.247864  normal 
 
 
-
 
NC_010501  PputW619_3046  acyl-CoA dehydrogenase domain-containing protein  75.33 
 
 
387 aa  602  1.0000000000000001e-171  Pseudomonas putida W619  Bacteria  normal  0.0247719  normal 
 
 
-
 
NC_007974  Rmet_3899  acyl-CoA dehydrogenase  75.2 
 
 
389 aa  602  1.0000000000000001e-171  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00207473  normal  0.36456 
 
 
-
 
NC_007509  Bcep18194_C7297  Acyl-CoA dehydrogenase  72.77 
 
 
390 aa  598  1e-170  Burkholderia sp. 383  Bacteria  normal  0.118142  normal  0.575396 
 
 
-
 
NC_009485  BBta_6663  acyl-CoA dehydrogenase  62.99 
 
 
388 aa  531  1e-150  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.831215 
 
 
-
 
NC_007778  RPB_3935  Acyl-CoA dehydrogenase-like  63.33 
 
 
391 aa  531  1e-150  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.32455  normal 
 
 
-
 
NC_011004  Rpal_1802  acyl-CoA dehydrogenase domain protein  62.56 
 
 
390 aa  531  1e-150  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.586412  n/a   
 
 
-
 
NC_007958  RPD_3695  acyl-CoA dehydrogenase-like  63.08 
 
 
391 aa  530  1e-149  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.451593  normal 
 
 
-
 
NC_009504  BOV_A0749  acyl-CoA dehydrogenase family protein  62.73 
 
 
386 aa  524  1e-147  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0799  acyl-CoA dehydrogenase family protein  62.73 
 
 
388 aa  522  1e-147  Brucella suis 1330  Bacteria  normal  0.666655  n/a   
 
 
-
 
NC_010505  Mrad2831_2852  acyl-CoA dehydrogenase domain-containing protein  62.73 
 
 
382 aa  524  1e-147  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.394252  normal 
 
 
-
 
NC_007925  RPC_4265  acyl-CoA dehydrogenase-like  64.49 
 
 
390 aa  518  1e-146  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2577  acyl-CoA dehydrogenase domain-containing protein  62.82 
 
 
427 aa  517  1.0000000000000001e-145  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5230  acyl-CoA dehydrogenase domain-containing protein  61.94 
 
 
384 aa  511  1e-144  Methylobacterium sp. 4-46  Bacteria  normal  0.131509  normal  0.0497047 
 
 
-
 
NC_008048  Sala_1692  acyl-CoA dehydrogenase-like protein  64.46 
 
 
387 aa  505  9.999999999999999e-143  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2735  acyl-CoA dehydrogenase-like protein  65.34 
 
 
381 aa  507  9.999999999999999e-143  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_1221  acyl-CoA dehydrogenase-like  62.33 
 
 
389 aa  503  1e-141  Novosphingobium aromaticivorans DSM 12444  Bacteria  hitchhiker  0.0080641  n/a   
 
 
-
 
NC_013739  Cwoe_5073  acyl-CoA dehydrogenase domain protein  59.32 
 
 
385 aa  498  1e-140  Conexibacter woesei DSM 14684  Bacteria  normal  0.275301  normal  0.195622 
 
 
-
 
NC_009952  Dshi_1058  acyl-CoA dehydrogenase domain protein  58.91 
 
 
396 aa  468  9.999999999999999e-131  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2783  acyl-CoA dehydrogenase domain protein  55.76 
 
 
394 aa  447  1.0000000000000001e-124  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.720925  n/a   
 
 
-
 
NC_009077  Mjls_3756  acyl-CoA dehydrogenase domain-containing protein  47.72 
 
 
404 aa  377  1e-103  Mycobacterium sp. JLS  Bacteria  normal  0.8183  normal  0.282187 
 
 
-
 
NC_008146  Mmcs_3744  acyl-CoA dehydrogenase-like protein  47.72 
 
 
404 aa  377  1e-103  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3817  acyl-CoA dehydrogenase domain-containing protein  47.72 
 
 
404 aa  377  1e-103  Mycobacterium sp. KMS  Bacteria  normal  normal  0.420794 
 
 
-
 
NC_009338  Mflv_2442  acyl-CoA dehydrogenase domain-containing protein  46.63 
 
 
395 aa  365  1e-100  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.830058  normal 
 
 
-
 
NC_007333  Tfu_1284  putative acyl-CoA dehydrogenase  46.48 
 
 
388 aa  358  6e-98  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4210  acyl-CoA dehydrogenase domain-containing protein  44.94 
 
 
399 aa  357  1.9999999999999998e-97  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0538412  normal 
 
 
-
 
NC_009921  Franean1_1608  acyl-CoA dehydrogenase domain-containing protein  45.99 
 
 
388 aa  351  1e-95  Frankia sp. EAN1pec  Bacteria  normal  0.0385936  normal 
 
 
-
 
CP001800  Ssol_0883  acyl-CoA dehydrogenase domain protein  43.93 
 
 
389 aa  348  1e-94  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_011004  Rpal_5033  acyl-CoA dehydrogenase domain protein  46.35 
 
 
388 aa  346  4e-94  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0216  Acyl-CoA dehydrogenase-like  46.11 
 
 
388 aa  344  2e-93  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.482345  normal 
 
 
-
 
NC_008786  Veis_1197  acyl-CoA dehydrogenase domain-containing protein  45.99 
 
 
387 aa  341  1e-92  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.344889  normal 
 
 
-
 
NC_009440  Msed_1218  acyl-CoA dehydrogenase domain-containing protein  43.01 
 
 
393 aa  337  2.9999999999999997e-91  Metallosphaera sedula DSM 5348  Archaea  normal  0.673164  normal 
 
 
-
 
NC_007958  RPD_0612  acyl-CoA dehydrogenase-like  44.79 
 
 
388 aa  336  3.9999999999999995e-91  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.564384  normal 
 
 
-
 
NC_008752  Aave_0176  acyl-CoA dehydrogenase domain-containing protein  46.77 
 
 
387 aa  336  5e-91  Acidovorax citrulli AAC00-1  Bacteria  normal  0.393885  normal  0.0741669 
 
 
-
 
NC_007348  Reut_B4519  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  44.91 
 
 
388 aa  335  1e-90  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3576  acyl-CoA dehydrogenase domain-containing protein  42.23 
 
 
387 aa  335  1e-90  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3566  putative acyl-CoA dehydrogenase  46.97 
 
 
388 aa  331  1e-89  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007950  Bpro_5275  acyl-CoA dehydrogenase-like  45.76 
 
 
388 aa  330  2e-89  Polaromonas sp. JS666  Bacteria  normal  0.033492  normal 
 
 
-
 
NC_010084  Bmul_1573  acyl-CoA dehydrogenase domain-containing protein  44.04 
 
 
388 aa  330  3e-89  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0397782 
 
 
-
 
NC_013922  Nmag_3454  acyl-CoA dehydrogenase domain protein  43.81 
 
 
403 aa  329  6e-89  Natrialba magadii ATCC 43099  Archaea  normal  0.263858  n/a   
 
 
-
 
NC_009719  Plav_2684  acyl-CoA dehydrogenase domain-containing protein  44.13 
 
 
389 aa  327  3e-88  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4458  acyl-CoA dehydrogenase-like protein  46.19 
 
 
390 aa  325  7e-88  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.0000540968  normal  0.0304373 
 
 
-
 
NC_010002  Daci_3675  acyl-CoA dehydrogenase domain-containing protein  45.43 
 
 
387 aa  324  1e-87  Delftia acidovorans SPH-1  Bacteria  normal  0.29817  normal  0.111107 
 
 
-
 
NC_007511  Bcep18194_B2643  Acyl-CoA dehydrogenase  42.89 
 
 
388 aa  323  4e-87  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_1586  acyl-CoA dehydrogenase domain-containing protein  43.26 
 
 
388 aa  321  9.999999999999999e-87  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0698291  normal  0.518401 
 
 
-
 
NC_007509  Bcep18194_C7290  Acyl-CoA dehydrogenase  43.08 
 
 
388 aa  320  1.9999999999999998e-86  Burkholderia sp. 383  Bacteria  normal  normal  0.882993 
 
 
-
 
NC_008390  Bamb_1567  acyl-CoA dehydrogenase domain-containing protein  43.26 
 
 
388 aa  321  1.9999999999999998e-86  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1188  acyl-CoA dehydrogenase-like  43.01 
 
 
388 aa  318  7.999999999999999e-86  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.348961  n/a   
 
 
-
 
NC_008542  Bcen2424_1668  acyl-CoA dehydrogenase domain-containing protein  43.01 
 
 
388 aa  318  7.999999999999999e-86  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0975176  n/a   
 
 
-
 
NC_010508  Bcenmc03_1641  acyl-CoA dehydrogenase domain-containing protein  43.01 
 
 
388 aa  317  2e-85  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.426767  normal  0.179373 
 
 
-
 
NC_007510  Bcep18194_A4816  Acyl-CoA dehydrogenase  42.49 
 
 
388 aa  314  1.9999999999999998e-84  Burkholderia sp. 383  Bacteria  normal  normal  0.405129 
 
 
-
 
NC_012791  Vapar_4712  acyl-CoA dehydrogenase domain protein  44.06 
 
 
389 aa  305  7e-82  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_3134  acyl-CoA dehydrogenase domain protein  42.27 
 
 
391 aa  303  2.0000000000000002e-81  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013510  Tcur_2462  acyl-CoA dehydrogenase domain protein  39.64 
 
 
393 aa  293  3e-78  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00196391  n/a   
 
 
-
 
BN001301  ANIA_06761  acyl-CoA dehydrogenase, putative (AFU_orthologue; AFUA_7G06510)  42.78 
 
 
427 aa  293  4e-78  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0976683  normal  0.137881 
 
 
-
 
NC_013595  Sros_3995  putative acyl-CoA dehydrogenase  41.9 
 
 
393 aa  291  1e-77  Streptosporangium roseum DSM 43021  Bacteria  normal  0.188129  normal  0.128089 
 
 
-
 
NC_007953  Bxe_C0852  putative acyl-CoA dehydrogenase  38.7 
 
 
390 aa  279  7e-74  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0725613 
 
 
-
 
NC_013922  Nmag_2124  acyl-CoA dehydrogenase domain protein  39.95 
 
 
388 aa  278  1e-73  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013743  Htur_0010  acyl-CoA dehydrogenase domain protein  37.86 
 
 
388 aa  263  6e-69  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007950  Bpro_5284  acyl-CoA dehydrogenase-like  36.02 
 
 
388 aa  243  6e-63  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013744  Htur_3800  acyl-CoA dehydrogenase domain protein  32.47 
 
 
397 aa  232  8.000000000000001e-60  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0378428  n/a   
 
 
-
 
NC_010531  Pnec_0573  acyl-CoA dehydrogenase domain protein  95.33 
 
 
116 aa  222  7e-57  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2163  acyl-CoA dehydrogenase domain-containing protein  32.81 
 
 
389 aa  222  7e-57  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.820192  normal  0.287496 
 
 
-
 
NC_008726  Mvan_0341  acyl-CoA dehydrogenase domain-containing protein  34.72 
 
 
378 aa  222  9e-57  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.600199  normal 
 
 
-
 
NC_007953  Bxe_C0513  putative acyl-CoA dehydrogenase  32.12 
 
 
387 aa  214  9.999999999999999e-55  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0391  acyl-CoA dehydrogenase  34.9 
 
 
375 aa  214  2.9999999999999995e-54  Brucella ovis ATCC 25840  Bacteria  normal  0.31925  n/a   
 
 
-
 
NC_004311  BRA0447  acyl-CoA dehydrogenase  34.44 
 
 
375 aa  213  3.9999999999999995e-54  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3214  acyl-CoA dehydrogenase domain-containing protein  33.25 
 
 
383 aa  212  1e-53  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  33.61 
 
 
379 aa  211  2e-53  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0833  putative acyl-CoA dehydrogenase  33.33 
 
 
385 aa  208  2e-52  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.00815342 
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  32.71 
 
 
379 aa  206  4e-52  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  32.71 
 
 
379 aa  206  6e-52  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  32.71 
 
 
379 aa  205  9e-52  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  33.07 
 
 
379 aa  204  2e-51  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
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