More than 300 homologs were found in PanDaTox collection
for query gene Vapar_1312 on replicon NC_012791
Organism: Variovorax paradoxus S110



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009720  Xaut_1346  acyl-CoA dehydrogenase domain-containing protein  87.08 
 
 
387 aa  699    Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6788  acyl-CoA dehydrogenase domain protein  86.82 
 
 
387 aa  714    Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0136  acyl-CoA dehydrogenase domain protein  78.65 
 
 
386 aa  655    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1312  acyl-CoA dehydrogenase domain protein  100 
 
 
387 aa  807    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2142  acyl-CoA dehydrogenase domain-containing protein  88.95 
 
 
387 aa  711    Polaromonas naphthalenivorans CJ2  Bacteria  normal  decreased coverage  0.00458594 
 
 
-
 
NC_009379  Pnuc_1388  acyl-CoA dehydrogenase domain-containing protein  80.26 
 
 
389 aa  658    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A0960  acyl-CoA dehydrogenase domain-containing protein  80.62 
 
 
387 aa  667    Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6654  acyl-CoA dehydrogenase domain-containing protein  84.24 
 
 
387 aa  676    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4806  acyl-CoA dehydrogenase domain-containing protein  85 
 
 
390 aa  686    Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0972672  normal  0.132645 
 
 
-
 
NC_008782  Ajs_0118  acyl-CoA dehydrogenase domain-containing protein  78.65 
 
 
386 aa  655    Acidovorax sp. JS42  Bacteria  normal  normal  0.3812 
 
 
-
 
NC_011083  SeHA_C0989  acyl-CoA dehydrogenase domain-containing protein  81.14 
 
 
387 aa  672    Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_5974  acyl-CoA dehydrogenase domain-containing protein  86.54 
 
 
385 aa  680    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0583  acyl-CoA dehydrogenase-like  86.58 
 
 
387 aa  696    Polaromonas sp. JS666  Bacteria  normal  0.530732  normal 
 
 
-
 
NC_010676  Bphyt_6603  acyl-CoA dehydrogenase domain protein  86.82 
 
 
387 aa  717    Burkholderia phytofirmans PsJN  Bacteria  normal  0.884829  normal  0.0708806 
 
 
-
 
NC_011080  SNSL254_A0928  acyl-CoA dehydrogenase domain protein  82.63 
 
 
387 aa  672    Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.327846  normal 
 
 
-
 
NC_007952  Bxe_B2584  putative acyl-CoA dehydrogenase  86.56 
 
 
387 aa  715    Burkholderia xenovorans LB400  Bacteria  normal  0.289384  normal  0.276761 
 
 
-
 
NC_007953  Bxe_C0655  putative acyl-CoA dehydrogenase  84.24 
 
 
386 aa  673    Burkholderia xenovorans LB400  Bacteria  normal  normal  0.936999 
 
 
-
 
NC_008062  Bcen_5810  acyl-CoA dehydrogenase-like  84.5 
 
 
401 aa  679    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.120503  n/a   
 
 
-
 
NC_010002  Daci_0198  acyl-CoA dehydrogenase domain-containing protein  85.75 
 
 
388 aa  667    Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A1009  acyl-CoA dehydrogenase domain protein  81.4 
 
 
387 aa  672    Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6270  acyl-CoA dehydrogenase domain-containing protein  86.28 
 
 
385 aa  680    Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_6174  acyl-CoA dehydrogenase domain-containing protein  84.5 
 
 
401 aa  679    Burkholderia cenocepacia HI2424  Bacteria  normal  0.785501  normal 
 
 
-
 
NC_010512  Bcenmc03_6853  acyl-CoA dehydrogenase domain-containing protein  79.16 
 
 
388 aa  630  1e-180  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2176  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  79.07 
 
 
387 aa  628  1e-179  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.247864  normal 
 
 
-
 
NC_009656  PSPA7_4635  acyl-CoA dehydrogenase  80 
 
 
386 aa  629  1e-179  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_52900  acyl-CoA dehydrogenase  80 
 
 
386 aa  629  1e-179  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.461273  normal 
 
 
-
 
NC_007509  Bcep18194_C7297  Acyl-CoA dehydrogenase  76.05 
 
 
390 aa  624  1e-177  Burkholderia sp. 383  Bacteria  normal  0.118142  normal  0.575396 
 
 
-
 
NC_010501  PputW619_3046  acyl-CoA dehydrogenase domain-containing protein  77 
 
 
387 aa  620  1e-177  Pseudomonas putida W619  Bacteria  normal  0.0247719  normal 
 
 
-
 
NC_007974  Rmet_3899  acyl-CoA dehydrogenase  76.24 
 
 
389 aa  612  9.999999999999999e-175  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00207473  normal  0.36456 
 
 
-
 
NC_007348  Reut_B3542  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  74.87 
 
 
389 aa  608  1e-173  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6663  acyl-CoA dehydrogenase  65.97 
 
 
388 aa  560  1e-158  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.831215 
 
 
-
 
NC_011004  Rpal_1802  acyl-CoA dehydrogenase domain protein  64.87 
 
 
390 aa  545  1e-154  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.586412  n/a   
 
 
-
 
NC_007778  RPB_3935  Acyl-CoA dehydrogenase-like  66.14 
 
 
391 aa  541  1e-153  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.32455  normal 
 
 
-
 
NC_007958  RPD_3695  acyl-CoA dehydrogenase-like  66.4 
 
 
391 aa  542  1e-153  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.451593  normal 
 
 
-
 
NC_007925  RPC_4265  acyl-CoA dehydrogenase-like  65.98 
 
 
390 aa  540  9.999999999999999e-153  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0749  acyl-CoA dehydrogenase family protein  64.38 
 
 
386 aa  536  1e-151  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0799  acyl-CoA dehydrogenase family protein  64.12 
 
 
388 aa  532  1e-150  Brucella suis 1330  Bacteria  normal  0.666655  n/a   
 
 
-
 
NC_010511  M446_5230  acyl-CoA dehydrogenase domain-containing protein  66.23 
 
 
384 aa  533  1e-150  Methylobacterium sp. 4-46  Bacteria  normal  0.131509  normal  0.0497047 
 
 
-
 
NC_008048  Sala_1692  acyl-CoA dehydrogenase-like protein  66.15 
 
 
387 aa  529  1e-149  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2852  acyl-CoA dehydrogenase domain-containing protein  64.91 
 
 
382 aa  530  1e-149  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.394252  normal 
 
 
-
 
NC_008148  Rxyl_2735  acyl-CoA dehydrogenase-like protein  68.62 
 
 
381 aa  526  1e-148  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_1221  acyl-CoA dehydrogenase-like  64.34 
 
 
389 aa  522  1e-147  Novosphingobium aromaticivorans DSM 12444  Bacteria  hitchhiker  0.0080641  n/a   
 
 
-
 
NC_009484  Acry_2577  acyl-CoA dehydrogenase domain-containing protein  65.97 
 
 
427 aa  522  1e-147  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5073  acyl-CoA dehydrogenase domain protein  62.01 
 
 
385 aa  506  9.999999999999999e-143  Conexibacter woesei DSM 14684  Bacteria  normal  0.275301  normal  0.195622 
 
 
-
 
NC_009952  Dshi_1058  acyl-CoA dehydrogenase domain protein  59.42 
 
 
396 aa  461  1e-129  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2783  acyl-CoA dehydrogenase domain protein  57.26 
 
 
394 aa  454  1.0000000000000001e-126  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.720925  n/a   
 
 
-
 
NC_007333  Tfu_1284  putative acyl-CoA dehydrogenase  49.36 
 
 
388 aa  384  1e-105  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2442  acyl-CoA dehydrogenase domain-containing protein  47.01 
 
 
395 aa  368  1e-101  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.830058  normal 
 
 
-
 
NC_008705  Mkms_3817  acyl-CoA dehydrogenase domain-containing protein  48.03 
 
 
404 aa  368  1e-100  Mycobacterium sp. KMS  Bacteria  normal  normal  0.420794 
 
 
-
 
NC_009077  Mjls_3756  acyl-CoA dehydrogenase domain-containing protein  48.03 
 
 
404 aa  368  1e-100  Mycobacterium sp. JLS  Bacteria  normal  0.8183  normal  0.282187 
 
 
-
 
NC_008146  Mmcs_3744  acyl-CoA dehydrogenase-like protein  48.03 
 
 
404 aa  368  1e-100  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4210  acyl-CoA dehydrogenase domain-containing protein  45.97 
 
 
399 aa  361  1e-98  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0538412  normal 
 
 
-
 
CP001800  Ssol_0883  acyl-CoA dehydrogenase domain protein  45.12 
 
 
389 aa  347  2e-94  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_007778  RPB_0216  Acyl-CoA dehydrogenase-like  47.24 
 
 
388 aa  343  2e-93  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.482345  normal 
 
 
-
 
NC_010338  Caul_3576  acyl-CoA dehydrogenase domain-containing protein  45.41 
 
 
387 aa  344  2e-93  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5033  acyl-CoA dehydrogenase domain protein  47.51 
 
 
388 aa  343  2e-93  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_3454  acyl-CoA dehydrogenase domain protein  46.63 
 
 
403 aa  341  1e-92  Natrialba magadii ATCC 43099  Archaea  normal  0.263858  n/a   
 
 
-
 
NC_007348  Reut_B4519  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  45.92 
 
 
388 aa  338  5.9999999999999996e-92  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1608  acyl-CoA dehydrogenase domain-containing protein  44.36 
 
 
388 aa  338  8e-92  Frankia sp. EAN1pec  Bacteria  normal  0.0385936  normal 
 
 
-
 
NC_009440  Msed_1218  acyl-CoA dehydrogenase domain-containing protein  43.77 
 
 
393 aa  335  7.999999999999999e-91  Metallosphaera sedula DSM 5348  Archaea  normal  0.673164  normal 
 
 
-
 
NC_007958  RPD_0612  acyl-CoA dehydrogenase-like  45.91 
 
 
388 aa  335  7.999999999999999e-91  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.564384  normal 
 
 
-
 
NC_009485  BBta_3566  putative acyl-CoA dehydrogenase  47.66 
 
 
388 aa  333  3e-90  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1573  acyl-CoA dehydrogenase domain-containing protein  45.14 
 
 
388 aa  333  4e-90  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0397782 
 
 
-
 
NC_009719  Plav_2684  acyl-CoA dehydrogenase domain-containing protein  44.25 
 
 
389 aa  332  5e-90  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1197  acyl-CoA dehydrogenase domain-containing protein  44.71 
 
 
387 aa  330  3e-89  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.344889  normal 
 
 
-
 
NC_010551  BamMC406_1586  acyl-CoA dehydrogenase domain-containing protein  44.62 
 
 
388 aa  329  4e-89  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0698291  normal  0.518401 
 
 
-
 
NC_008390  Bamb_1567  acyl-CoA dehydrogenase domain-containing protein  44.62 
 
 
388 aa  329  4e-89  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7290  Acyl-CoA dehydrogenase  44.62 
 
 
388 aa  329  6e-89  Burkholderia sp. 383  Bacteria  normal  normal  0.882993 
 
 
-
 
NC_007511  Bcep18194_B2643  Acyl-CoA dehydrogenase  44.36 
 
 
388 aa  327  2.0000000000000001e-88  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1641  acyl-CoA dehydrogenase domain-containing protein  44.62 
 
 
388 aa  327  2.0000000000000001e-88  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.426767  normal  0.179373 
 
 
-
 
NC_008060  Bcen_1188  acyl-CoA dehydrogenase-like  44.36 
 
 
388 aa  327  3e-88  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.348961  n/a   
 
 
-
 
NC_008542  Bcen2424_1668  acyl-CoA dehydrogenase domain-containing protein  44.36 
 
 
388 aa  327  3e-88  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0975176  n/a   
 
 
-
 
NC_007510  Bcep18194_A4816  Acyl-CoA dehydrogenase  44.62 
 
 
388 aa  325  7e-88  Burkholderia sp. 383  Bacteria  normal  normal  0.405129 
 
 
-
 
NC_008752  Aave_0176  acyl-CoA dehydrogenase domain-containing protein  45.41 
 
 
387 aa  325  1e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  0.393885  normal  0.0741669 
 
 
-
 
NC_010002  Daci_3675  acyl-CoA dehydrogenase domain-containing protein  47.12 
 
 
387 aa  324  2e-87  Delftia acidovorans SPH-1  Bacteria  normal  0.29817  normal  0.111107 
 
 
-
 
NC_007950  Bpro_5275  acyl-CoA dehydrogenase-like  45.67 
 
 
388 aa  319  6e-86  Polaromonas sp. JS666  Bacteria  normal  0.033492  normal 
 
 
-
 
NC_012791  Vapar_4712  acyl-CoA dehydrogenase domain protein  45.65 
 
 
389 aa  316  4e-85  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4458  acyl-CoA dehydrogenase-like protein  44.65 
 
 
390 aa  310  2.9999999999999997e-83  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.0000540968  normal  0.0304373 
 
 
-
 
BN001301  ANIA_06761  acyl-CoA dehydrogenase, putative (AFU_orthologue; AFUA_7G06510)  41.58 
 
 
427 aa  298  1e-79  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0976683  normal  0.137881 
 
 
-
 
NC_013922  Nmag_3134  acyl-CoA dehydrogenase domain protein  40.99 
 
 
391 aa  295  1e-78  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013510  Tcur_2462  acyl-CoA dehydrogenase domain protein  39.43 
 
 
393 aa  291  1e-77  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00196391  n/a   
 
 
-
 
NC_013595  Sros_3995  putative acyl-CoA dehydrogenase  40.21 
 
 
393 aa  282  6.000000000000001e-75  Streptosporangium roseum DSM 43021  Bacteria  normal  0.188129  normal  0.128089 
 
 
-
 
NC_007953  Bxe_C0852  putative acyl-CoA dehydrogenase  38.12 
 
 
390 aa  277  3e-73  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0725613 
 
 
-
 
NC_013922  Nmag_2124  acyl-CoA dehydrogenase domain protein  39.43 
 
 
388 aa  273  5.000000000000001e-72  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013743  Htur_0010  acyl-CoA dehydrogenase domain protein  38.64 
 
 
388 aa  265  8e-70  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007950  Bpro_5284  acyl-CoA dehydrogenase-like  37.37 
 
 
388 aa  248  2e-64  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013744  Htur_3800  acyl-CoA dehydrogenase domain protein  34.74 
 
 
397 aa  242  6e-63  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0378428  n/a   
 
 
-
 
NC_009675  Anae109_2163  acyl-CoA dehydrogenase domain-containing protein  36.49 
 
 
389 aa  235  8e-61  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.820192  normal  0.287496 
 
 
-
 
NC_009077  Mjls_3214  acyl-CoA dehydrogenase domain-containing protein  34.77 
 
 
383 aa  228  1e-58  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3265  acyl-CoA dehydrogenase domain-containing protein  34.77 
 
 
384 aa  221  1.9999999999999999e-56  Mycobacterium sp. KMS  Bacteria  normal  0.0866653  normal 
 
 
-
 
NC_008146  Mmcs_3203  acyl-CoA dehydrogenase-like protein  34.77 
 
 
384 aa  221  1.9999999999999999e-56  Mycobacterium sp. MCS  Bacteria  normal  0.499599  n/a   
 
 
-
 
NC_008726  Mvan_0341  acyl-CoA dehydrogenase domain-containing protein  35.51 
 
 
378 aa  219  3.9999999999999997e-56  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.600199  normal 
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  33.24 
 
 
379 aa  219  7e-56  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3040  acyl-CoA dehydrogenase domain-containing protein  32.8 
 
 
402 aa  216  5e-55  Geobacter uraniireducens Rf4  Bacteria  normal  0.0629704  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  32.98 
 
 
379 aa  215  9.999999999999999e-55  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  33.71 
 
 
379 aa  213  2.9999999999999995e-54  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_011146  Gbem_2832  acyl-CoA dehydrogenase domain protein  31.45 
 
 
379 aa  213  2.9999999999999995e-54  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3827  acyl-CoA dehydrogenase domain protein  33.25 
 
 
394 aa  213  5.999999999999999e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  0.893751  n/a   
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  31.45 
 
 
379 aa  212  7.999999999999999e-54  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009338  Mflv_4615  acyl-CoA dehydrogenase domain-containing protein  34.52 
 
 
384 aa  211  2e-53  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0437237  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>