| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3899 |
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| Symbol | |
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| ID | 4040752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 443993 |
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| End bp | 445162 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637979318 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_586036 |
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| Protein GI | 94312827 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00207473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.36456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGCTG CACAGGACCA AGACCTGATT TACCCGGAAA TCCGCGAGGC CGTACGCGAC
CTCTGCAAGC AATTCGATTC GGCCTATTGG CAACGCATCG AGGAACACAG CGCATTTCCG
GAGGAGTTCG TCCAGGCGCT GACCCACGCC GGCTGGCTGT CCGCGCTGAT TCCCGAGGCA
TACGGTGGCT CCGGCCTGCC GCTGACCGCA GCCTCCGTGA TCATGGAAGA GATCAACCGC
AACGGCGGCA ACTCGGGGGC GTGCCACGGT CAGATGTACG TGATGGGCTG CCTGCTGCGC
CACGGCTCAG AGGCGCAGAA GCAGCGCTGG CTGCCCGGCA TCGCTTCGGG CGAGTTGCGC
ATGCAGTCGA TGGCCGTGAC CGAACCGACC ACCGGTACCG ATACCACCAA GCTCAAGACC
ACGGCAGTGC GGCGCGGCGA CAAGTACGTG ATCAACGGCC AGAAGGTCTG GATCTCGCGC
GTCCAGCATT CCGACCTGAT GCTGCTGCTG GCACGCACCA CGCCGCTGGA CCAGGTGAAG
AAGAAGTCCG AAGGTCTGTC GGTGTTCGTC GTCGACTTGC GCGAAGCGAT TGGCAACGGC
CTGACGGTCC AGCCGATCCG CAACATGGTC AACCACGAAA CCAATGAGCT GTTCTTCGAT
AACCTCGAAA TCCCGGCCGA AAACCTGATT GGCGAGGAAG GCAAGGGACT CAAGTACATC
CTCGACGGCC TGAATGCCGA ACGTATCCTG ATTGCCGCCG AGTGCATCGG CGATGGCTAC
TGGTTCGTCG AACGCGCCAG CAGCTACGCC CGCGAGCGGA TCGTGTTCGA TCGCCCGATC
GGCCAGAACC AGGGCGTGCA GTTCCCGATC GCGCGTTCGT TCGTCAATGT GGAAGCCGCC
AGTCTGATGC GTTACAAGGC CGCCCAGCTG TTCGACGCAG GCAAGCCCTG CGGCAAGGAA
GCCAACATGG CGAAGCTGCT GGCCGCCGAT GCTTCATGGG AAGCGGCCAA CGTCTGCCTG
CAGACGCACG GTGGATTCGG CTTTGCCGCC GAGTACGACA TCGAACGCAA GTTCCGTGAA
ACGCGCCTGT ACCAGGTGGC GCCGATCTCG ACCAACCTGA TCCTGTCGTT CGTCGCCGAA
CACGTTCTCG AACTGCCCCG CTCGTTCTGA
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| Protein sequence | MHAAQDQDLI YPEIREAVRD LCKQFDSAYW QRIEEHSAFP EEFVQALTHA GWLSALIPEA
YGGSGLPLTA ASVIMEEINR NGGNSGACHG QMYVMGCLLR HGSEAQKQRW LPGIASGELR
MQSMAVTEPT TGTDTTKLKT TAVRRGDKYV INGQKVWISR VQHSDLMLLL ARTTPLDQVK
KKSEGLSVFV VDLREAIGNG LTVQPIRNMV NHETNELFFD NLEIPAENLI GEEGKGLKYI
LDGLNAERIL IAAECIGDGY WFVERASSYA RERIVFDRPI GQNQGVQFPI ARSFVNVEAA
SLMRYKAAQL FDAGKPCGKE ANMAKLLAAD ASWEAANVCL QTHGGFGFAA EYDIERKFRE
TRLYQVAPIS TNLILSFVAE HVLELPRSF
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