| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4712 |
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| Symbol | |
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| ID | 7971722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5006575 |
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| End bp | 5007744 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795297 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002946583 |
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| Protein GI | 239817673 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCT CCCTCAATGA AGACCAGCGC TCGCTGGTGG CCGCCATCGA ACGGCTGTGC
GAAGACTTCC CCGCCGACTA CTGGCGCGAC CACGACGACC GCGCCGCATT CCCGCACGAA
TTCCACCGCG CCGTGGCCGA CAGCGGCTGG CTCGGCATCG CGATGCCCGA GGCGCAGGGC
GGCGCGGGCC TGGGCATCAC CGAGGCGGCG CTGATGATGC GCGCCATCAG CGCGTCGGGC
GCGGGCATGT CGGGCGCTTC GTCGGTGCAC ATGAACATCT TCGGGCTCAA CCCGGTGGTG
GTGTTCGGCA GCGAGGCACA GCGCCAGCGT TTCCTGCCGC CGCTGATCGC GGGCACCGAG
AAGGCCTGCT TCGCCGTGAC CGAGCCCGAC GCGGGGCTCG ACACCACCCG CCTCAAGACG
CAGGCGGTGC GCCAGCCGAA CGGCAGCTAC CTGCTGCACG GCCGCAAGAT ATGGATATCG
ACCGCGCAGG TGGCCGACCG CATGCTGATC TTGACGCGCA CCACGCCGCT CGATCAGGTG
AAGAAGCCCA CGCAGGGGCT CACGCTGTTC TACACGCCGC TGGACCGCGC CAAGGTCGAG
GTGCGCGAGA TCCACAAGCT CGGCCGCGCG GCGGTCGATT CGAACATGCT CTTCATCGAC
GGCCTCGAAG TGCCGGAGGA AGACCGCATC GGCGAGGAAG GGCGCGGCTT CGAATACATC
CTGCACGGGC TCAACCCCGA GCGCATATTG ATTGCGGCCG AGGCCATCGG CATTGGCCGC
GCCGCGCTGC GCATCGCGGC GCAGTACGCG CAGGAGCGCG TCGTGTTCGG CCGGCCGATC
GGCCAGAACC AGGGCGTGGC GCACCCTCTG GCGCGCGCCT GGGCCAACCT CGAGGCGGCC
GACCTGATGG TGTTCAAGGC CGCCACGCTG TACGACGCGG GCGAGCCCTG CGGCATCGAG
GCCAACGCCG CCAAGTACCT GGCGGCCGAG GCGGCGCACG ACGCCTGCCA GAACGCGGTT
CTCACGCTGG GCGGCATGGG CTATGCGAAG GAATACCATG TCGAGCGGCT GCTGCGCGAG
AGCTACATTC CGCGCATTGC GCCGGTCAGT CCGCAGATGA TCCTGAACTT CATTGCGGAA
AAGGCGCTCG GCCTGCCCAA GTCGTACTGA
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| Protein sequence | MNFSLNEDQR SLVAAIERLC EDFPADYWRD HDDRAAFPHE FHRAVADSGW LGIAMPEAQG
GAGLGITEAA LMMRAISASG AGMSGASSVH MNIFGLNPVV VFGSEAQRQR FLPPLIAGTE
KACFAVTEPD AGLDTTRLKT QAVRQPNGSY LLHGRKIWIS TAQVADRMLI LTRTTPLDQV
KKPTQGLTLF YTPLDRAKVE VREIHKLGRA AVDSNMLFID GLEVPEEDRI GEEGRGFEYI
LHGLNPERIL IAAEAIGIGR AALRIAAQYA QERVVFGRPI GQNQGVAHPL ARAWANLEAA
DLMVFKAATL YDAGEPCGIE ANAAKYLAAE AAHDACQNAV LTLGGMGYAK EYHVERLLRE
SYIPRIAPVS PQMILNFIAE KALGLPKSY
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